Pairwise Alignments

Query, 449 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 455 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  425 bits (1093), Expect = e-123
 Identities = 222/443 (50%), Positives = 314/443 (70%), Gaps = 4/443 (0%)

Query: 10  DELTVLIVEDDPHVLLGCQQALALEDIPSVGVGSAEEALKRIGENFAGIVISDIRLPGID 69
           ++  +LIV+D+P +     Q   LE   ++ +  A++    + +N+ GIVISD+ +P ID
Sbjct: 7   NQYDILIVDDEPLIGSALVQLFELESYRALALTDAKQIGLGLPDNWPGIVISDVNMPDID 66

Query: 70  GLELLTRLKALDKSLPVVLITGHGDISMAVGAMRNGAYDFMEKPFSPERLVDVARRALEQ 129
           GL L+  L A DK +P++L+TGHGDI+MAV A++ GAYDF+EKPF+ E ++D+A+RALE+
Sbjct: 67  GLSLMRTLLAQDKDIPIILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIAKRALEK 126

Query: 130 RGLAREVWSLRRQLAERDSLEGRIIGRSPAMQNLRELIANVADTSANVLIEGETGTGKEL 189
           R L  E  SL+R+L  + +   RI+G SP ++ +R +I  V D  A+VLIEGETGTGKEL
Sbjct: 127 RALTLENRSLKRELESQSTPGPRILGHSPGIKQMRHIIHQVIDMPADVLIEGETGTGKEL 186

Query: 190 VARCLHDFSRRHAHQFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHAHEGTL 249
           VAR LHD S R    FVA+NCG +PE + ESE+FG E+ AFTGA K RIGK E+A+ GTL
Sbjct: 187 VARYLHDHSPRAEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEYANGGTL 246

Query: 250 FLDEVESMPINLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDELSRANQFRSD 309
           FLDE+ES P++LQ+KLLRVL++R +ERLGSN+S+ +D R+IAATK DL  L    +FR D
Sbjct: 247 FLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIDLDIRIIAATKVDLKSLCDTGEFRQD 306

Query: 310 LYYRLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRSVPELDNQTLSSLMSHDWPGN 369
           L YRLN+VT+ +P LRERREDI  LF HF + +S R+ +++  L  +  + L+SHDWPGN
Sbjct: 307 LLYRLNLVTVPIPALRERREDIGLLFLHFARVASARYHKALIPLTAEYTAQLVSHDWPGN 366

Query: 370 VRELRNVAERFALGLP--AFKKS-GTSSG-SQGLAFTEAVEAFERNLLNDALQRSGGNLT 425
           VRELRN+AER+ L  P  AF  S G SS  +  ++  + VE FER L+ +AL  + G++ 
Sbjct: 367 VRELRNLAERYVLLGPEAAFATSLGQSSQLNANMSLQQRVEFFERLLIEEALSNNKGSIK 426

Query: 426 QASQELGMAKTTLFDKVKKYGLS 448
              ++L + + TL+DK++K+GL+
Sbjct: 427 LTMEQLELPRKTLYDKMQKFGLN 449