Pairwise Alignments

Query, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  323 bits (829), Expect = 6e-93
 Identities = 181/463 (39%), Positives = 272/463 (58%), Gaps = 14/463 (3%)

Query: 5   ILVVDDEPKLCDLLASALGQNDVQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMDGPAL 64
           + VVDD+  +  ++   L    ++     +    L  LE+E  D+++SD RMPGMDG AL
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 65  LAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQFRDIM 124
           L ++  R P +PVI+MTA+S +  AV + + GA++Y+ KPFD+DE    V +A+      
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQ 125

Query: 125 RDNARLRAELDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMVARAI 184
           R  +   +E   +     ++G++PA ++V +A+  +  SS ++L+ GESGTGKE+VA A+
Sbjct: 126 RKTSHRPSE---NYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHAL 182

Query: 185 HKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEV 244
           H+H  RA KPF+A+N AAIP+ L+ESE+FGH KGAFTGA   R GRF+QA+ GTLFLDE+
Sbjct: 183 HRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEI 242

Query: 245 GDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDLYYRL 304
           GDMPL +Q ++LR L +     VG     KVDVR++AAT++NL   V   +FREDL++RL
Sbjct: 243 GDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRL 302

Query: 305 NVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGNIRELQ 364
           NV  I +PSLRER +DI  L +HF    +   G  +   +   +  +    WPGN+R+L+
Sbjct: 303 NVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLE 362

Query: 365 NCVERATIVAASPVIEDIDLPGYLFASK-----------PNQGDVTAILSDGPGIPQDLD 413
           N     T++A+   +   DLP  L + +             Q +  A  +   G  + L 
Sbjct: 363 NMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSALASGETELLA 422

Query: 414 AALAEVEKAYILAALQESNGVQAAAAAKIGISERSFWYRLKKL 456
            AL E E+  + AAL  +NG +  AA  +G    +   +LK+L
Sbjct: 423 YALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465