Pairwise Alignments

Query, 589 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  134 bits (336), Expect = 1e-35
 Identities = 103/363 (28%), Positives = 169/363 (46%), Gaps = 27/363 (7%)

Query: 243 YSGLYWPIFNDAGDLQGVIFSGLLRHTSLVGLVNQSNLFVLIFLLSSALSLAAGVLVSRR 302
           Y   Y PI++    + G++F G      L    +  N   ++ L+   ++L    L++R 
Sbjct: 280 YLTAYEPIYDSDNKIIGMLFVGTPESKFLALQADVRNQTFVVGLIGLLIALIVSYLINRG 339

Query: 303 LTKPLRDLSQGVSAVISGDYAHRVVVSGGDELAQLSSTFNHMTERLG-----------EL 351
           + KPL  L QG   V +G Y  +V+V   DE  +L+  FN M  ++            EL
Sbjct: 340 IIKPLEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFNKMATQINISDDKLKKHAEEL 399

Query: 352 HHLEAQLRRRDRLHALGEVAMGLAHEIRNPLGIIKTATQLL--HRRADLADTDKRHLEYV 409
                +L+  D+L +  E+   ++HE+R PL  IK   +L+       + D+ K+ L+  
Sbjct: 400 KISYNELKELDKLKS--ELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVA 457

Query: 410 ISEVSRINDLITEFLDFAKPN----PPLRVLLPARPLVEEILGFCAPELATHTIDAQIDD 465
              + R+  LI   LD +K         R  +  R +V +++ +  P LAT   + +++ 
Sbjct: 458 DDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKP-LATEK-NIKLNK 515

Query: 466 QAPGATIYADAKQLKQACLNLILNAIDAMPEGGRLTLGIRADGENTVISIADTGQGIPAD 525
           +     I AD  ++ Q   NLI NAI   P    + +    + E+  + + D G GIP  
Sbjct: 516 EVEDIAIEADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKK 575

Query: 526 MIERIFTPF------VTTKASGTGLGLAKVYSIMESHDGSIECASEKDAGATFSLYIPAS 579
            +E+IF  F         K  G+GLGLA   SI+E+H GSI   SE   G+TF + +P S
Sbjct: 576 DMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHIILPIS 635

Query: 580 GED 582
            +D
Sbjct: 636 AKD 638