Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 600 a.a., putative two-component sensor histidine kinase protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.6 bits (161), Expect = 3e-15
 Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 64/338 (18%)

Query: 270 LLIFSTLLVGLLLYLAVRLLRSFAEINRVNRALHAANETLEQRVERRTR-------QLKD 322
           +L+ S    GLLL   +        + R+ ++     + LEQRV+ RT        QLKD
Sbjct: 306 VLLLSATCYGLLLLFTLLQRERRHSLARMQQS----RDELEQRVKERTAELEAANTQLKD 361

Query: 323 AQSELLDSARQAGMAEIATNVLHNVGNVLNSVNISAELVTRKLRSSKALGLGKAMQLINE 382
            Q EL+ +A+   +  ++ ++ H                           L + +  I  
Sbjct: 362 TQDELIQAAKLTVVGTMSASINHE--------------------------LNQPLAAIRS 395

Query: 383 HKADLGTFLTEDEKGKLLPGYLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQQSY 442
           +  +  TFL  D     +PG   + + AI +E   +TD LA +   V   K      Q  
Sbjct: 396 YTQNTQTFLERD-----MPGRARENL-AIILE---LTDRLADI---VGQFKSFTRKSQGK 443

Query: 443 AGAATLLEPVHISGLMEDALRMNAGALSRH--HVTVVKEYAQVPEILADKHRLLLIMVNL 500
            G       V ++  ++ AL +    L +    +T+  E   + ++  D  RL  ++VNL
Sbjct: 444 DGV------VMLANCLQQALTIVQPELDKQKAQLTIHCEDESL-KVWCDGTRLQQVLVNL 496

Query: 501 ISNAKYAMSNLSDRPRQMTLKVQPLEDNTLQISVKDDGEGIPAENMTRIFTHGFTT-RKE 559
           I+NA  AMS    +     L +  L  + + I ++D G G+    M +IF   +TT  ++
Sbjct: 497 ITNALNAMSQSPVK----RLSISLLGGDPVTIRIQDSGPGVRDSLMEKIFEPYYTTSERQ 552

Query: 560 GHGFGLHSCALAAVEMNGQLSAHSDGPGLGAVFTLTIP 597
           G G GL         M G +   ++ P  GA+F +T+P
Sbjct: 553 GLGLGLSISRRIIESMQGDIRV-ANAPEGGAIFDITLP 589