Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 550 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 46/296 (15%)

Query: 321 KDAQSELLDSARQAGMAEIATNVLHNVGNVLNSVNISAELVTRKLRSSKALGLGKAMQLI 380
           K AQ  LL S + A + ++   + H +   + +   +A L+  K +S     L +A++  
Sbjct: 287 KRAQDALLVSEKMASLGQLVAGIAHEINTPIGTGVTAASLLAEKTQS-----LVQAVEAG 341

Query: 381 NEHKADLGTFL-TEDEKGKLLPGYLNQLVDAIAVEQQGMTDEL---AQLSKSVDHIKDIV 436
              ++ L  +L    E  + +   L +  + I   +Q   D+    ++L K  D++++I+
Sbjct: 342 ALRRSQLDAYLHVARESSRFILSNLTRAAELIQSFKQVAVDQATDESRLFKVRDYLEEIL 401

Query: 437 STQQSYAGAATLLEPVHISGLMEDALRMNAGALSRHHVTVVKEYAQVPEILADKHRLLLI 496
            + Q                            L R   T+  E      +      L  +
Sbjct: 402 LSLQP--------------------------RLKRTPHTMTLECPDDLAMYGPPGALFRV 435

Query: 497 MVNLISNAKYAMSNLSDR----PRQMTLKVQPLEDNTLQI-SVKDDGEGIPAENMTRIFT 551
           + NL+ N+   M  L +     P  M L+V   +D    +    D G GIP +N+ RIF 
Sbjct: 436 ITNLVINS--LMHGLEEGATAPPGHMVLRVGHEKDTDCVVFRYHDTGRGIPEKNLKRIFD 493

Query: 552 HGFTTRK--EGHGFGLHSC-ALAAVEMNGQLSAHSDGPGLGAVFTLTIPMTPAGSP 604
             FTTR+   G G GLH    L    + G L+ HS  PG GA+F + +P   AG P
Sbjct: 494 PFFTTRRGEGGTGLGLHIVYNLVTQTLGGSLAVHSP-PGQGAIFLIRVPRLSAGLP 548