Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 89.0 bits (219), Expect = 5e-22
 Identities = 87/344 (25%), Positives = 151/344 (43%), Gaps = 62/344 (18%)

Query: 272 IFSTLLVGLLLYLAVRLLRSFA-----EINRVNRALHAANETLEQRVERRTR-------Q 319
           I+ +L   LLLY A+ LL + A     E  +  R +  A+E LEQRV+ RT+       Q
Sbjct: 313 IYRSLPPLLLLYGALYLLCALALLFAIEKRKNTRRMQQAHEQLEQRVKERTQALETSHQQ 372

Query: 320 LKDAQSELLDSARQAGMAEIATNVLHNVGNVLNSVNISAELVTRKLRSSKALGLGKAMQL 379
           LK+AQ EL+ +A+   +  ++ ++ H +   L ++   A+     L  +K   +   +  
Sbjct: 373 LKEAQDELIQAAKLTVIGSLSASINHEINQPLAAIRSYAQNTQTLLSRAKWDDVSSNIMT 432

Query: 380 INEHKADLGTFLTEDEKGKLLPGYLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQ 439
           I E                                   +TD LA +   V   K      
Sbjct: 433 IIE-----------------------------------LTDRLAAI---VSQFKSFTRKS 454

Query: 440 QSYAGAATLLEPVHISGLMEDALRMNAGALSRHHVTVVKEYAQVPEIL-ADKHRLLLIMV 498
           Q    A      + ++  + DAL +    + +  + +V    +   +L  D  RL  +++
Sbjct: 455 QGNDKA------ISVAQCIRDALTIVQPEVDKQGIDLVLNNTECQTLLWGDPIRLQQVLI 508

Query: 499 NLISNAKYAMSNLSDRPRQMTLKVQPLEDNTLQISVKDDGEGIPAENMTRIFTHGFTTRK 558
           NL+SNA  AM   ++ P+Q+ + V  +  N L+I+++D G GI    M +IF   +T+ +
Sbjct: 509 NLMSNAMVAMR--ANNPKQLIIGV--VVSNRLEITIEDTGTGIDESQMQKIFDPYYTSSR 564

Query: 559 EGHGFGLHSCALAAVEMNGQLSAHSDGPGLGAVFTLTIPMTPAG 602
           +G G GL         M G++S  +   G GA+F +T+P+   G
Sbjct: 565 QGLGLGLSISRRIVEAMQGKISVANRQQG-GAIFQITLPIHAVG 607