Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 52/349 (14%)

Query: 276  LLVGLLLYLAVRLLRSFAEINRVNRALHAANETLEQRVERRT--RQLKDAQSELLDSARQ 333
            +LV L ++      R  A +  ++    A  E  +   E +   ++L +AQS+LL S + 
Sbjct: 686  VLVNLQIFRLSGGQRVLAVVRDIDGRKRAEQELQQALAEAKALNQRLAEAQSQLLQSEKM 745

Query: 334  AGMAEIATNVLHNVGNVLNSVNISAELVTRKLRSSKAL----------------GLGKAM 377
            A + ++A  V H + N +  V  +   +   LR   A+                 L  A 
Sbjct: 746  ASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYLREIFAIIAAYEAADSGPCRDCRQLESAR 805

Query: 378  QLINEHKADLGTFLTEDEKGKLLPGYLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVS 437
            QL  E   D   FL  D            +V  +A  + G    L +++K    +KD   
Sbjct: 806  QLKLEKDFD---FLRSD------------IVQLLAESRDG----LERVAKIARDLKDFSR 846

Query: 438  TQQSYAGAATLLEPVHISGLMEDALRMNAGALSRHHVTVVKEYAQVPEILADKHRLLLIM 497
              ++ +  A L +       ++  L +    L ++  TV KEY ++P +  +  ++  + 
Sbjct: 847  AGEAESQWADLHQG------LDSTLNIVWNEL-KYKCTVHKEYGELPLVWCEPSQINQVF 899

Query: 498  VNLISNAKYAMSNLSDRPRQMTLKVQPLEDNTLQISVKDDGEGIPAENMTRIFTHGFTTR 557
            +NL+ NA  A+    D    + L+     D    ++V D G GI  E + R+F   FTT+
Sbjct: 900  MNLLVNAAQAIPKKGD----IWLRTGRRGDEVF-VAVSDSGCGIAPEYLHRLFEPFFTTK 954

Query: 558  KEGHGFGLH-SCALAAVEMN-GQLSAHSDGPGLGAVFTLTIPMTPAGSP 604
              G G GL  S A + V+ + G+L   S+ PG G+ FT+ +P+     P
Sbjct: 955  PVGKGTGLGLSLAYSIVQKHQGRLEVESE-PGRGSTFTVWLPIEARPRP 1002