Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 76.3 bits (186), Expect = 4e-18
 Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 58/338 (17%)

Query: 295 INRVNRALHAANETLEQRVERR-----------------TRQLKDAQSELLDSARQAGMA 337
           + R    L  A + LE+ V RR                  ++L++AQ +L+ S + A + 
Sbjct: 416 VERRTAQLSLAKQALEEDVRRREASENELRQRNAELLEVNKRLQEAQEQLVQSEKMASIG 475

Query: 338 EIATNVLHNVGNVLNSVNISAELVTRKLRSSKAL--GLGKAM-QLINEH---------KA 385
           ++A  V H + N +  V  +   + R L   + +   L  A+ QL +EH         K 
Sbjct: 476 QLAAGVAHEINNPIGYVQSNLSTLGRYLEDMQTVLDSLATAVAQLPSEHPAAQAVARVKQ 535

Query: 386 DLG-TFLTEDEKGKLLPGYLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQQSYAG 444
           DL   FL ED     LP  + Q  D I            ++ K V  +KD      S   
Sbjct: 536 DLDFDFLLED-----LPSLVTQSRDGID-----------RVRKIVADLKDF-----SRLD 574

Query: 445 AATLLEPVHISGLMEDALRMNAGALSRHHVTVVKEYAQVPEILADKHRLLLIMVNLISNA 504
           A+   +   +   ++  L +    + ++   VV+EY Q+PE+     +L  + +NL+ N+
Sbjct: 575 ASQDWQWADLHQGLDSTLNIVNNEI-KYRAEVVREYGQLPEVECLPSQLNQVFLNLLVNS 633

Query: 505 KYAMSNLSDRPRQMTLKVQPLED-NTLQISVKDDGEGIPAENMTRIFTHGFTTRKEGHGF 563
            +AM     +  ++TL+    E  + + + V+D+G GI  ENM R+F   FTT+  G G 
Sbjct: 634 AHAMPE--GQMGRITLRSGHDEPAHQVWLEVEDNGSGISPENMHRLFDPFFTTKPVGKGT 691

Query: 564 GLH-SCALAAVEM-NGQLSAHSDGPGLGAVFTLTIPMT 599
           GL  S +   V+  +GQ++  S+  G G  F + +P++
Sbjct: 692 GLGLSLSYGIVQKHHGQITVSSE-LGKGTTFRIVLPVS 728