Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 67.8 bits (164), Expect = 2e-15
 Identities = 113/450 (25%), Positives = 176/450 (39%), Gaps = 90/450 (20%)

Query: 160 QLQDVATDTYDLLLSSLEFAQVTSDDRAADILVGLGKLAINKEQLPSEFQGPVDILSNHI 219
           Q + +   + D +LS      VTS +R A+ L G     +        F  P + L+   
Sbjct: 414 QYEAIVRSSDDAILSKTLDGIVTSWNRGAEELFGYSAAEMVGRSTLHLF--PPECLAEE- 470

Query: 220 SLILREQPVVNDLLERIATVPVAEHLDALTTHLDQDQQAADLIDHQYHRYLLIFSTLLVG 279
                      D+LER+      +H D  T  + +D +  D+         +  S LL G
Sbjct: 471 ----------RDILERLRRGETVKHFD--TRRIRKDGRIVDVS--------VTISPLLDG 510

Query: 280 LLLYLAV-RLLRSFAEINRVNRALHAANETLEQRVERRTRQLKDAQSELLDSARQAGMAE 338
               L + ++ R           L    + LE+ V+ RTRQL+    EL D+A  A +A+
Sbjct: 511 EGRVLGISKIARDITARKAAEAELQRHRQRLEELVQERTRQLE----ELKDAAESANVAK 566

Query: 339 IA--TNVLHNVGNVLNSVNISAELVTRK-LRSSKALGLGKAMQLINEHKADLGTFLTEDE 395
            A   N+ H +   LN++     L+ R  L+  +A  + K ++   +H            
Sbjct: 567 SAFLANMSHEIRTPLNAMTGLTHLIRRAGLKPQQAEHMDK-LEAAAQH------------ 613

Query: 396 KGKLLPGYLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQQSYAGAATLLEPVHIS 455
               L G +N ++D   +E      E A +      ++ ++    S+     L E V   
Sbjct: 614 ----LLGVINAILDLSKIEAGKFALEEAPV-----RVESLLGNVASF-----LQERVQAK 659

Query: 456 GLMEDALRMNAGALSRHHVTVVKEYAQVPEILADKHRLLLIMVNLISNAKYAMSNLSDRP 515
           GL+   LR  A  L              P +L D  RL   ++N   NA       S   
Sbjct: 660 GLV---LRTEAQPLP-------------PHLLGDPTRLQQALLNYAGNALKFTEQGS--- 700

Query: 516 RQMTLKVQPLE----DNTLQISVKDDGEGIPAENMTRIFT------HGFTTRKEGHGFGL 565
             +TL+V  LE    D  L+  V+D G GIP E M ++F+      +  T R  G G GL
Sbjct: 701 --ITLRVHTLEEGEADALLRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGGTGLGL 758

Query: 566 HSCALAAVEMNGQLSAHSDGPGLGAVFTLT 595
                 A  M G+  A S+ PG G+ F  T
Sbjct: 759 AITRKLAQLMGGEAGASSE-PGRGSTFWFT 787