Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 74.7 bits (182), Expect = 1e-17
 Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 38/315 (12%)

Query: 284 LAVRLLRSFAEINRVNRALHAANETLEQRVERRTRQLKDAQSELLDSARQAGMAEIATNV 343
           LA +  R    + R N  + AA E LE +VE RTR L+D   EL     Q  +A      
Sbjct: 402 LAEQFDRMLDLLQRRNAQIQAAAEQLEMKVEERTRSLQDKTLEL-----QRNVA------ 450

Query: 344 LHNVGNVLNSVNISAELVTR-KLRSSKALGLGKAMQLINEHKADLGTFLTEDEKGKLLPG 402
                 +LN      +LVT  KL +   L  G A ++ N     LG         +LL  
Sbjct: 451 ------LLNETR--QQLVTNEKLTALGELTAGIAHEINNPTAVILGNM-------ELLRY 495

Query: 403 YLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQQSYAGAATLLEPVH---ISGLME 459
            L    + +        +E+  + + V  I  I+ +   Y+       P+    I+ ++E
Sbjct: 496 ELGDKAEVVK-------EEIDLVIQQVGRISTIIRSLLQYSRPGEFNAPLEMHPITPIIE 548

Query: 460 DALRMNAGALSRHHVTVVKEYAQVPEILADKHRLLLIMVNLISNAKYAMSNLSDRPRQMT 519
           + L +   ++ +  V ++ E      +  ++ +LL +++NL+ NA +AM        +  
Sbjct: 549 EMLVLVRHSIQKQEVVLITELNASCPVQVNRPQLLQVLINLVVNAAHAMDGKGRIWVRTY 608

Query: 520 LKVQPLEDNTLQISVKDDGEGIPAENMTRIFTHGFTTRKEGHGFGLHSCALAAVEMNGQL 579
             VQ      ++I V+D+G GI  E + RIF   +TTRK+G G GL S +   ++  G  
Sbjct: 609 DWVQQDIAIGVKIEVEDEGSGIEPEQLGRIFDPFYTTRKDGTGLGL-SLSYGIIKRIGGT 667

Query: 580 SAHSDGPGLGAVFTL 594
              S   G G++FT+
Sbjct: 668 IEVSSVLGKGSIFTI 682