Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 75/317 (23%), Positives = 141/317 (44%), Gaps = 23/317 (7%)

Query: 288 LLRSFAEINRVNRALHAANETLEQR---VERRTRQLKDAQSELLDSARQAGMAEIATNVL 344
           +++   E+    +A    +E LEQ    +    ++L+ AQ++LL S +   + ++A  V 
Sbjct: 123 IVQDVTELASYYQAQKCLSEQLEQEHTALSLLNKKLEAAQNQLLQSEKMVAIGQLAAGVA 182

Query: 345 HNVGNVLNSVNISAELVTRKLRSSKALGLGKAMQLINEHKADLGTFLTEDE--KGKLLPG 402
           H + N +  VN  + L + +  ++K L L    Q +      +  F  E +  K      
Sbjct: 183 HEINNPIGFVN--SNLQSLQDYNNKLLKLLNFYQKLTHKIGSVPYFTLEQDMLKRYQFEF 240

Query: 403 YLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQQSYAGAATLLEPVHISGLMEDAL 462
             + L D I    +G+ D +A + KS+     + S++  YA          I G+ E+ L
Sbjct: 241 ICSDLPDLIRESIEGL-DRVAVIVKSLKSFSHVDSSEWQYANV--------IEGI-ENTL 290

Query: 463 RMNAGALSRHHVTVVKEYAQVPEILADKHRLLLIMVNLISNAKYAMSNLSDRPRQMTLKV 522
           ++ A  +    V +      +PE+     +L  + +NL+ NA  A+    +    +++ V
Sbjct: 291 KIAANQIKYKAVVLRNFQDNLPELYCQPMQLNQVFLNLLVNAAQAIEERGE----ISIDV 346

Query: 523 QPLEDNTLQISVKDDGEGIPAENMTRIFTHGFTTRKEGHGFGLH-SCALAAVEMNGQLSA 581
               D    I ++D G GI A ++ +IF   +TT+  G G GL  S + + V+ +     
Sbjct: 347 SA-SDAEFIIVIRDTGSGIAASDLRKIFEPFYTTKLVGTGTGLGLSLSYSIVQKHKGEIK 405

Query: 582 HSDGPGLGAVFTLTIPM 598
            S   G G  FT+ +P+
Sbjct: 406 VSSVLGEGTAFTVILPI 422