Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 756 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 67.4 bits (163), Expect = 2e-15
 Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 47/284 (16%)

Query: 319 QLKDAQSELLDSARQAGMAEIATNVLHNVGNVLNSVNISAELVTRKLRSSKALGLGKAMQ 378
           Q  +A+ +++ + + A + E+AT V H +   L  +  ++  + RK R  + +       
Sbjct: 509 QRLEAEQKVIQAGKMATLGEMATGVAHELNQPLTVIKAASGFLLRKARKGEPVA------ 562

Query: 379 LINEHKADLGTFLTEDEKGKLLPGYLNQLVDAIAVEQQGMTDELAQLSKSVDHIKDIVST 438
                                         D ++     M   + + S+ ++H+++    
Sbjct: 563 -----------------------------PDVLSTMTAEMDAHVDRASRIIEHMREFGRK 593

Query: 439 QQSYAGAATLLEPVHISGLMEDALRMNAGALSRHHVTVVKEY-AQVPEILADKHRLLLIM 497
                    +LE V ++ ++  A    +  ++   +T+  +  A  P ++A  +RL  ++
Sbjct: 594 SD------IVLERVSVNEVLRSATEFFSRQMTVRGITIEWQLDASEPVVMAVANRLEQVV 647

Query: 498 VNLISNAKYAMSNLS---DRPRQMTLKVQPLEDNTLQISVKDDGEGIPAENMTRIFTHGF 554
           +NL+ NA+ A+   +   D  R +TL+ +  +   + + V D G GIP     RIF   F
Sbjct: 648 INLLLNARDAIEEHAAAHDARRVITLRTET-DGREVVMEVCDSGPGIPRALQQRIFEPFF 706

Query: 555 TTRKEGHGFGLH-SCALAAVEMNGQLSAHSDGPGLGAVFTLTIP 597
           TT+K G G GL  S +   V+  G   +  D PG GA FT+ +P
Sbjct: 707 TTKKVGKGTGLGLSISYGLVKDFGGSISVGDAPGGGARFTVRMP 750