Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 565 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 20/267 (7%)

Query: 347 VGNVLNSVNISAELVTRKLRSSKALGLGKAMQLINEHKADLGTFLTEDEKGKLLPGYLNQ 406
           VG + +S    A L    L+SSK   LGK    +  H+ +    L  +  G +     + 
Sbjct: 301 VGKLKDSDRKQAMLDAEFLQSSKMAALGKLAAGV-AHEVNNPLMLIRENAGWIK----DL 355

Query: 407 LVDAIAVEQQGMTDELAQLSKSVDHIKDIVSTQQSYAGAATLLEPVH----ISGLMEDAL 462
           LV+      +   + +    K   H+           G A  LEP+     ++ L E  +
Sbjct: 356 LVEEDPAAMRNHKELVTAADKIEMHVDRAKGVTHRMLGLARRLEPLQDDVCVNLLTEQTI 415

Query: 463 RMNAGALSRHHVTVVKEYAQ-VPEILADKHRLLLIMVNLISNAKYAMSNLSDRPRQMTLK 521
           +         H+T+VKE A  +P I  D  ++  +++N++ NA  A+     R   +T++
Sbjct: 416 KFLETEALHRHITLVKELADDLPPITTDATQVQQVLLNILDNAIDAVG----RDGTITIR 471

Query: 522 VQPLEDNT-LQISVKDDGEGIPAENMTRIFTHGFTTRK--EGHGFGLHSCALAAVEMNGQ 578
                D + + +SV D GEGIP E ++RIF   +TT+K  EG G GL  C     ++ G+
Sbjct: 472 TGAAPDRSEVFVSVSDTGEGIPPELLSRIFDPFYTTKKVGEGTGLGLAICHSILEKLGGR 531

Query: 579 LSAHSDGPGLGAVFTLTIPMTPAGSPA 605
           + A S  PG GA FT+T+P+  A +PA
Sbjct: 532 IHAAS-APGQGATFTVTLPL--AANPA 555