Pairwise Alignments

Query, 382 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 423 a.a., Uncharacterized protein conserved in bacteria from Phaeobacter inhibens DSM 17395

 Score =  149 bits (377), Expect = 1e-40
 Identities = 125/399 (31%), Positives = 186/399 (46%), Gaps = 61/399 (15%)

Query: 5   RDPRIDFFRGLALIFIFWDHVPHNPLGQITLRNIGFSDAAEVFVFLAGYAAVLAYGKILQ 64
           RDPR+DF+RG+A+  I   H+P N          GFSDA E+FVF +G A+ +A+G    
Sbjct: 35  RDPRLDFYRGIAMFIILCAHIPGNRWTGWIPARFGFSDATEIFVFCSGMASAIAFGGTFG 94

Query: 65  RDGYWIASLKILRRAWVLYVVHIFLLAMLMGIVFFANSHVE-------TRDLVEEMGLTH 117
           R G+ + S ++L R W ++  HI L       VF A S           +  +  + L  
Sbjct: 95  RQGWLMGSARVLFRCWQVFWAHIGL------FVFIATSMAALDLYGSFDKSYIASLNLRP 148

Query: 118 FVTHPQQALTDELLLRFKPNLMDPLPLYIVLLSGLPLVLPLLLRKTWAVVGVSLTVYLLA 177
           F  +P   L   + L + PN  D LP+Y+V+L+ +PL++ L     WAV   S+ ++LLA
Sbjct: 149 FFENPVPQLVGLMTLSYVPNYFDILPMYLVVLALMPLMMGLERIGIWAVAAASIGIWLLA 208

Query: 178 -PWM------GWNLRA--IADGVWYFNPVTWQLLFVLGGAAAIHARQPRPVETRGLLRQP 228
            P+M      G +L A   +   W+FNP  WQLLF   G A +    P P  +R L+   
Sbjct: 209 NPYMVGLGPDGLSLSAEPWSSREWFFNPFGWQLLF-FTGFAFMKGWLPAPPVSRVLV--- 264

Query: 229 LFVAAAAYSVMAGIITISWR---WPEAHDAWMPSPLSDLLYPI--------SKTDLSPVR 277
             V AA+Y V+      SW+   W EA +      L+DL+ P          KTD   +R
Sbjct: 265 --VVAASYLVLLAPFG-SWKVFLWVEAWN----QDLADLIRPTWKQTAEWREKTDFGLLR 317

Query: 278 LLHFLALAYVTAKLLPGMGWTRHWLAQQS-------------CRMGRYSLEVFCLGVLLA 324
             HFL+LAY+   ++ G G  R   + QS              ++G+ SL VF   + LA
Sbjct: 318 FGHFLSLAYL-GWVIAGEGGQRLIASGQSTAARIWAVLLSLITKVGQQSLAVFVFSMALA 376

Query: 325 PLADMLNALAGDALAMQLFSATVG---VVLMGLLAAWLE 360
            L      L   ++    F    G   ++    +AAW +
Sbjct: 377 RLLGFAMDLTDRSVLTTAFFNLTGFGLIIGCAYIAAWFK 415