Pairwise Alignments

Query, 778 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 950 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  281 bits (720), Expect = 9e-80
 Identities = 172/443 (38%), Positives = 256/443 (57%), Gaps = 10/443 (2%)

Query: 340 AMQSGIAVR---ERQLAHNALHDPLTGLPNRALAMERLGSAISA----RRPVVLLYLGIE 392
           A  S ++VR   E +L +   +D LTGL NR L  ERL  A        R + +LY+ ++
Sbjct: 508 AFISDLSVRRKIEERLRYLTHYDDLTGLANRGLFKERLHEACQRVRRNGRNMAVLYIDLD 567

Query: 393 NYRVINEGFGPQGVEEMLREASRCLSISLLASDTAARIAGSEFLLLLENTEVDRAVAR-A 451
            ++++NE  G +  + +LRE SR LS +L  +DT AR++G EF++LL+      ++A   
Sbjct: 568 RFKLLNESLGHEAADALLREVSRRLSTTLAEADTIARLSGDEFVVLLDAYGSLSSLAHLG 627

Query: 452 DRLYALLTEPQRIGNDELRHEVSMGIAAYPADGQQVEELISRAAIARHDAASLPGH-LQI 510
            RL   + +P  I   EL    S+G++  P + +  E L+ +A IA   A  L G+ LQ 
Sbjct: 628 SRLLQRIRKPMVIDEQELVISASIGVSLLPDNSRDAEALLRQANIAMQQAKHLGGNTLQF 687

Query: 511 YQQDRDLAHQRQITLIRDLRRAAIEGELFLCYQPKLDLKHGHVCQAEALLRWQHPTLGQV 570
           +      +    + L   LR+A   G+L + YQP+L L    +  AEAL+RW+HP LG V
Sbjct: 688 FTDRPQASSMHYLQLENQLRKALEVGQLEVFYQPRLSLADDSLEAAEALVRWRHPELGLV 747

Query: 571 SPVEFIPLAERTGSMRSLTLWVIEEAIRQIAEWAQRGML-IQLSVNISVDDLADDDLAIR 629
           +P +FIPLAE TG +  L  +V+ EA RQ  +W Q G+  I++SVN+SV  L   +    
Sbjct: 748 APAQFIPLAEETGLIIPLGEFVLREACRQARQWQQDGLAAIRVSVNLSVKQLRQGNFVSL 807

Query: 630 VTALLMTYQVEAEQLIFEITESAIMHNPLQALSVLEQLRGCGISLSVDDFGTGYSSLAQL 689
           V  +L    + A  L  E+TES ++ +   A+S+ EQLR  G+ L++DDFGTG+SSL+ L
Sbjct: 808 VRQVLEETGLPATMLELELTESQLLDDIDNAISISEQLRALGVKLAIDDFGTGFSSLSYL 867

Query: 690 QRLPVQELKIDQSFVRNLDSTSGDGVIVRSTIEMSHNLGLKVVAEGVEFAPSLKLLKQWN 749
           +R PV  +KID+SF+  L+ +S D  I R+ I M H+L  KVVAEGVE    +  LK  +
Sbjct: 868 KRFPVDYVKIDRSFISELEHSSQDAAITRAIIAMVHSLERKVVAEGVETQAQMDFLKANH 927

Query: 750 CDTAQGYLISRPLNAMAFEMWMR 772
           CD  QGYL+S P+ A+ F   +R
Sbjct: 928 CDEIQGYLLSPPVPALQFAELLR 950