Pairwise Alignments

Query, 778 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  266 bits (679), Expect = 8e-75
 Identities = 162/454 (35%), Positives = 262/454 (57%), Gaps = 7/454 (1%)

Query: 328  HDEFGLLARAFNAMQSGIAVRERQ---LAHNALHDPLTGLPNRALAMERLGSAISARRPV 384
            +DE G L+  +  + S I+ R++Q   L     +D LTGLPNR+     LG+ ++     
Sbjct: 971  YDELGELSH-YVGVFSDISRRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNKEITH 1029

Query: 385  VLLYLGIENYRVINEGFGPQGVEEMLREASRCLSISLLASDTAARIAGSEFLLLLENT-E 443
             L+ L ++N++ IN+  G Q  +++L+  S  +   L  + +  R+ G EF ++L+ T +
Sbjct: 1030 ALMVLDLDNFKRINDSLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSD 1089

Query: 444  VDRAVARADRLYALLTEPQRIGNDELRHEVSMGIAAYPADGQQVEELISRAAIARHDAAS 503
            +  + A A R+         IGN++L   VS+GI  YP D Q  + L+ +A IA + A S
Sbjct: 1090 ISASAAIAGRVIEAFKTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKS 1149

Query: 504  LPGHLQIYQQDRDLAHQRQITLIRDLRRAAIEGELF-LCYQPKLDLKHGHVCQAEALLRW 562
              G+   +  +    H  +   I +L R  ++ +LF + YQPK+DLK GHV   EAL+R 
Sbjct: 1150 AGGNCYQFYSESLNQHAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRL 1209

Query: 563  QHPTLGQVSPVEFIPLAERTGSMRSLTLWVIEEAIRQIAEWAQRGMLI-QLSVNISVDDL 621
             HPT G + P +FIPLAE  G +  +   V+ +A     +W ++G+   +++VN+S    
Sbjct: 1210 NHPTRGLIPPNDFIPLAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQF 1269

Query: 622  ADDDLAIRVTALLMTYQVEAEQLIFEITESAIMHNPLQALSVLEQLRGCGISLSVDDFGT 681
            A  DL  R+ ++L   Q+ A  L  EITE  ++  P  A++V++QL   G+SL++DDFGT
Sbjct: 1270 ALPDLQQRIESILRLTQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGT 1329

Query: 682  GYSSLAQLQRLPVQELKIDQSFVRNLDSTSGDGVIVRSTIEMSHNLGLKVVAEGVEFAPS 741
            GYSSL+ L+R P+  LKID++FV ++D +  D  +V S I ++HN+GL VV EGVE A  
Sbjct: 1330 GYSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQ 1389

Query: 742  LKLLKQWNCDTAQGYLISRPLNAMAFEMWMRRER 775
            L +L+  NC+  QGY+ S+ +N + F   ++ +R
Sbjct: 1390 LNILRALNCEEIQGYIFSKAINEIEFTQLLQDDR 1423