Pairwise Alignments

Query, 434 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

 Score =  110 bits (276), Expect = 7e-29
 Identities = 121/442 (27%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 10  SDPVQVLEQALEKASQVPAVFISLTAERARREAEAAAAR-WRAGQPLSVFDGVPLAWKDL 68
           +D V    + +EK S V A FI +  E+  +EAE          +PL    G  +A K  
Sbjct: 3   TDRVSDYLEKIEK-SDVNA-FIDVNGEKVLKEAEELEKNDTLKNKPLY---GKIVAVKSN 57

Query: 69  FDVAG-SITTAGAAYRRNAPAALLDAPTVGLLCRAGMVSVGKTNLSELAYSGLGLNPHFG 127
            +V G  I+ A     +       DA  V  L   G + VG TN+ E A    G    +G
Sbjct: 58  INVKGYKISCASKTLEKYV--GTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYG 115

Query: 128 TPHNPHGTDQPRIPGGSSSGSAVAVAAAIVPIAMGTDTAGSIRIPSAFNGLVGYRSSSRR 187
              NP   D  RIPGGSSSGSA AVAA +  +A+G+DT GSIR P++  G+VG++ S   
Sbjct: 116 PTKNPAAMD--RIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGV 173

Query: 188 YSRDGVFPLAHTLDSLGPLTRSVRDALAIDDLLHGRRQTHIARSLKGQRF---------- 237
            SR G+  LA + D +GPLT++  DAL + + + G  ++  + SL+  +F          
Sbjct: 174 VSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSD-STSLETPKFEKKDISNYKI 232

Query: 238 --VLAQQDV-EPAVRNNLLRAVEQLKAHGALIEERECPTFQATLDLIKHHGWLGSFEAFA 294
             V    DV +  +RN + + +E  K  G  I +         L       ++  F A  
Sbjct: 233 GVVKEFMDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFSATR 292

Query: 295 LHEALLDSPDAEQ-LDPRVRRRLEAARALPASQLLHLF-----DARRRLQQQLMADLDGA 348
            ++        E+     V RR+   + +   +    +      AR+ ++++++   + A
Sbjct: 293 KYDGRRYGEFIEEACGEEVLRRILIGKHISEQEFSGKYYKKALQARKSMKKEMLGLFNSA 352

Query: 349 -LLITPTIAHVAPALAPLEADDELFVKTNLATLRLTMPGSLLDMPGVTLPSGRDAQGLPT 407
            L++ PT+  +   L    +  E++     A   LT+P ++  +    +  G +  G+P 
Sbjct: 353 DLIVGPTVPKLPHKLGEDVSPMEMY-----AYDVLTVPTNICGICSGVVRCG-NISGVPV 406

Query: 408 GLLLSAPAGEDARLLRAALSVE 429
           GL +     ED ++L A +  E
Sbjct: 407 GLQIQGAPLEDEKVLSAMIEFE 428