Pairwise Alignments

Query, 300 a.a., GTPase Era from Pseudomonas simiae WCS417

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 12  VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGNVQAVYVDTPGMHKGG 71
           VA+VGRPNVGKSTL N +   + A+ +  P  TR    G    G  + + +DT G+  G 
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI-DGS 63

Query: 72  EKALNRYMNKTASAALKDVDVVIFVVD-RTKWTDEDQMVLERVQYVTGPLIVALNKTDRI 130
           E+ +   M + + AA+ + DVV+F+VD R   T  D+ + + ++ +  P I+ +NK D I
Sbjct: 64  EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGI 123

Query: 131 EDKAELMPHLSWLQEQLPNAQIIPISAQHGHNLDAL-ERVI 170
           +  A+      W   QL   Q+  I+A HG  + AL +RV+
Sbjct: 124 D--ADAASAEFW---QLGMDQMYQIAAAHGRGVGALIDRVL 159



 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 9/168 (5%)

Query: 12  VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGNVQAVYVDTPGMHKGG 71
           +AI+GRPNVGKSTL N ILG++  +    P TTR ++         + V +DT G+ +  
Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRR-- 265

Query: 72  EKALNRYMNKTASA----ALKDVDVVIFVVD-RTKWTDEDQMVLERVQYVTGPLIVALNK 126
            K +N  + K +      A++D +VV+ VVD R   +D+D  +L         +++A+NK
Sbjct: 266 RKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNK 325

Query: 127 TDRI--EDKAELMPHLSWLQEQLPNAQIIPISAQHGHNLDALERVIAE 172
            D +  + K  +   L      +  A+I  ISA HG  +  L   + E
Sbjct: 326 WDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373