Pairwise Alignments

Query, 229 a.a., ribonuclease III from Pseudomonas simiae WCS417

Subject, 229 a.a., ribonuclease III from Methanococcus maripaludis JJ

 Score =  105 bits (261), Expect = 9e-28
 Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 11/226 (4%)

Query: 4   SLSRLERQLGYTFKDQELMVLALTHRSFAGR-------NNERLEFLGDAILNFVAGEALF 56
           +  +L  +L   F D  +   A  H S+          NNERLE+LGDA+L+ +  E LF
Sbjct: 3   NFEKLLSKLDIQFNDLNIFKRAFMHSSYINEQKNTNLENNERLEYLGDAVLDLIISEYLF 62

Query: 57  ERFPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALE 116
           ++     EG++S+LRA+ V    L   A+      Y+ LG GEL S G+ + +I++D  E
Sbjct: 63  KK-ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYILLGKGELNSEGYNKPAIVSDVFE 121

Query: 117 ALIGAIYLDAGMEAAKERVTAWLTSEIESLTLVDTNKDPKTRLQEFLQSRGCDLPRYEVV 176
           A I AIYLD G+++ K+ V   +   IE  +  +   D KT+LQE +        +Y  +
Sbjct: 122 AFIAAIYLDQGLDSVKKFVYNHIIPIIEK-SSKEFFIDYKTKLQE-IPGLSNKTIKYVNL 179

Query: 177 DIQGEPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIAL 222
           +  GE H + F V  + +  N   +G G S++ AE  AA  AL+ L
Sbjct: 180 EETGEAHDKKFVVTVK-SDRNILGKGIGKSKKEAEMKAAKNALLKL 224