Pairwise Alignments

Query, 599 a.a., elongation factor 4 from Pseudomonas simiae WCS417

Subject, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (422), Expect = 2e-45
 Identities = 141/505 (27%), Positives = 234/505 (46%), Gaps = 64/505 (12%)

Query: 4   LSHIRNFSIIAHIDHGKSTLADRFIQMCGGLAER-EMEAQVLDSMDLERERGITIKAHSV 62
           +  +RN +IIAH+DHGK+TL D+ +Q  G L  R ++E +V+DS D+E+ERGITI A + 
Sbjct: 6   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNT 65

Query: 63  TLYYKAKDGITYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTA 122
            + +       Y++N +DTPGH DF  EV R ++  +  LL+VDA  G   Q+      A
Sbjct: 66  AINWN-----DYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120

Query: 123 IEQGLEVMPVLNKIDLPQAEPERVKEEIEKII-GIDATD----------------AVTCS 165
              GL+ + V+NKID P A P+ V +++  +   + ATD                A    
Sbjct: 121 FAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVE 180

Query: 166 AKTGLGVDEVLERLVHTIPAPTGNYEDPLQALIIDSWFDNYLGVVSLVRVRHGRVKKGDK 225
            +TG  ++ + + +V  + AP  + + PLQ  I    + +Y+GV+ + R++ G+VK   +
Sbjct: 181 GETGENMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQ 240

Query: 226 ILV------KSTGKIHLVDSVGVFNPKHTATVDLKAGEVGFIIAGIKDIH-GAPVGDTLT 278
           + V      K  GKI  V  +G    + + T    AG++   + G+ ++     + D   
Sbjct: 241 VTVIGADGKKRNGKIGTV--LGYLGLQRSETDQATAGDI-VAVTGLGELKISDTICDVNA 297

Query: 279 LSSTPDVDVLPGFKRIQPQVYAGLFPVSSDDFEDFR---EALQKLTLNDSSLQY-TPESS 334
           L + P + V      +  QV    F      F   R   E L+K  +++ +L+    E  
Sbjct: 298 LEALPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDP 357

Query: 335 DALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVIFELLLKTGETIYVDNPSKLP 394
           D     FR    G LH+ I+ E + RE             FEL +   E I      +L 
Sbjct: 358 DK----FRVSGRGELHLSILIENMRREG------------FELAVSRPEVILKHEDGQL- 400

Query: 395 DLSAIEDMREPIVRANILVPQEHLGNVITLCIEKRGVQRDMLFLGT-QVQVTYDMPMNEV 453
                    EP     I V +EH G ++     ++G  +DM   G  ++++ + MP +  
Sbjct: 401 --------MEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMP-SRG 451

Query: 454 VLDFFDRLKSTSRGYASLDYHFDRY 478
           ++ F     + + G   L + FD Y
Sbjct: 452 LIGFQTEFMTLTSGSGLLYHSFDHY 476