Pairwise Alignments

Query, 599 a.a., elongation factor 4 from Pseudomonas simiae WCS417

Subject, 695 a.a., elongation factor G from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (269), Expect = 1e-27
 Identities = 64/158 (40%), Positives = 92/158 (58%), Gaps = 8/158 (5%)

Query: 1   MSDLSHIRNFSIIAHIDHGKSTLADRFIQMCGG---LAEREMEAQVLDSMDLERERGITI 57
           M+DLS  RN  I AH+D GK+T  +R +++ G    L E    A  +D M+ E ERGITI
Sbjct: 1   MADLSLYRNIGIFAHVDAGKTTTTERILKLTGKIHRLGEVHDGASTMDFMEQEAERGITI 60

Query: 58  KAHSVTLYYKAKDGITYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVA 117
           ++ + T ++K      ++ N IDTPGHVDFT EV RSL   +G + V     GVE QS  
Sbjct: 61  QSAATTCFWKG-----HRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSET 115

Query: 118 NCYTAIEQGLEVMPVLNKIDLPQAEPERVKEEIEKIIG 155
           N   A E  +  +  +NK+D   A+  RV E+++K++G
Sbjct: 116 NWRYANESEVSRLIFVNKLDRMGADFFRVVEQVKKVLG 153



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 42/293 (14%)

Query: 121 TAIEQGLEVMPVLNKIDLPQAEPERVKEEIEKIIGIDATDAVTC-SAKTGLGVDEVLERL 179
           TA+EQ  E+M    + + P  E  ++K  I K     A     C SA    G+  VL+ +
Sbjct: 215 TAVEQDDELMMAYMEGEEPTVE--QIKACIRKGTRDLAFFPTFCGSAFKNKGMQLVLDAV 272

Query: 180 VHTIPAPTG---------------------NYEDPLQALIIDSWFDNYLGVVSLVRVRHG 218
           V  +P+PT                      + + PL+AL      D + G ++ VR+  G
Sbjct: 273 VDYLPSPTEVEPQPLTDPATGEPTGEVATVSVDAPLKALAFKIMDDRF-GALTFVRIYSG 331

Query: 219 RVKKGDKILVKSTGKIHLVDSVGVFNPKHTATVD-LKAGEVGFIIAGIKDIHGAPVGDTL 277
           ++KKGD IL  +TGK   +  +   +      V+  +AG++   I G+K++     G TL
Sbjct: 332 KIKKGDTILNSATGKTERIGRMVEMHANDRNEVESAQAGDI-IAIVGMKNVQ---TGHTL 387

Query: 278 ---TLSSTPDVDVLPGFKRIQPQVYAGLFPVSSDDFEDFREALQKLTLNDSSLQYTPESS 334
                  T +  + P      P +   + P   +  E    A+ K+   D S Q   E+ 
Sbjct: 388 CDPKHECTLEPMIFP-----TPVISIAVKPKDKNGSEKMGIAIGKMVAEDPSFQV--ETD 440

Query: 335 DALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVIF-ELLLKTGETIY 386
           +  G     G +G LH++I  + L+R Y ++L   AP V + E + K  E  Y
Sbjct: 441 EDSGETILKG-MGELHLDIKVDILKRTYGVELEVGAPQVAYRETITKAVEDSY 492



 Score = 43.1 bits (100), Expect = 4e-08
 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 398 AIEDMREPIVRANILVPQEHLGNVITLCIEKRGVQRDMLFLGTQVQVTYDMPMNEVVLDF 457
           A   + EPI++ ++  P++H+G+VI     +RG+ +D     T V+V  D+P++E +  +
Sbjct: 594 AAPQLLEPIMKVDVFTPEDHVGDVIGDLNRRRGMIKDQEMGLTGVRVKADVPLSE-MFGY 652

Query: 458 FDRLKSTSRGYASLDYHFDRY 478
              L++ + G       F  Y
Sbjct: 653 IGSLRTMTSGRGQFSMEFSHY 673