Pairwise Alignments

Query, 255 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 265 a.a., integral membrane protein from Caulobacter crescentus NA1000

 Score =  215 bits (548), Expect = 7e-61
 Identities = 114/255 (44%), Positives = 171/255 (67%), Gaps = 17/255 (6%)

Query: 6   NPEIWIAFFTLTALEIVLGIDNIIMISILVSRMPKHMQARTRIFGLALAMVTRILLLLSI 65
           +P  W A  TL  +E+VLGIDN+I ISIL +++P+  + R R  G++LA++ R++LL +I
Sbjct: 10  DPAAWAALITLIVMEVVLGIDNLIFISILSNKLPEEHRQRVRRIGISLALIMRLVLLSTI 69

Query: 66  TWVMQLTNDLFVV-------------FGQGISGRDLILFFGGLFLLWKSSQEMYHALEG- 111
            +++ LT  +F +             F    S RDLIL  GG+FL+WK+++E++HA++  
Sbjct: 70  AFIVGLTAPVFDLGISGPVGAHGEPGFETAFSWRDLILIAGGVFLIWKATKEIHHAVDPA 129

Query: 112 -EDETHDEPKGAG--GKFIYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIVVAVLV 168
             D+  ++ K           I QI ++D+VFS+DS++TAVGM  H+P+MV A++VAV V
Sbjct: 130 KSDDVLEKDKATVVINNVGSAIFQIILLDLVFSIDSILTAVGMTEHLPIMVIAVLVAVTV 189

Query: 169 MMLAAGTISEFIDKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAV 228
           M+LAA  ++ FI+ +P++ MLAL FLL++GTVLIAE F  HVPKGY+Y AMAFS  VE +
Sbjct: 190 MLLAADPLANFINNNPTVVMLALGFLLMIGTVLIAEGFGGHVPKGYIYTAMAFSAGVEGL 249

Query: 229 NIKMRTAIAKKKKQQ 243
           N+  R   AKK++QQ
Sbjct: 250 NMMARKRDAKKQEQQ 264