Pairwise Alignments

Query, 948 a.a., valyl-tRNA synthetase from Pseudomonas simiae WCS417

Subject, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 1257 bits (3253), Expect = 0.0
 Identities = 615/955 (64%), Positives = 739/955 (77%), Gaps = 9/955 (0%)

Query: 1   MDKTYQPHAIETSWYQTWESENYFAPQG--AGDSYTIMIPPPNVTGSLHMGHGFNNAIMD 58
           M+KTY P +IE   Y+TWE + YF P G  + D+Y+IMIPPPNVTGSLHMGH F + IMD
Sbjct: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 59  ALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQLEAT-GQSRHDLGREKFLEKIWEWKDQ 117
            LIR +RM+G+NTLWQ GTDHAGIATQM+VER++ A  G+++HD GR+ F++KIWEWK +
Sbjct: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120

Query: 118 SGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLH 177
           SGG I++Q+RRLG+SVDW RERFTMDDG  +AV+E FVRL++D LIYRGKRLVNWD KLH
Sbjct: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180

Query: 178 TAISDLEVENHDEKGFLWNLKYPLADGAKTAEGNDYLIVATTRPETMLGDAAVAVNPTDE 237
           TAISDLEVEN + KG +W+ +YPLADG KTA+G DY++VATTRPETMLGD  VAVNP D 
Sbjct: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240

Query: 238 RYQALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNI 297
           RY+ LIGK + LP+VGRRIPI+ D++ D E GTGCVKITPAHDFNDYEVGKRH LP++NI
Sbjct: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300

Query: 298 FDKNAAVLPACQVFNLDGTLNESIDGKIPAEYAGLDRFEARKQIVAAFDAAGLLVSVDDH 357
              +A +  A +VFN +G  + +   +IPA+Y G++RF ARK IVA F+  GLL  + DH
Sbjct: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360

Query: 358 ALKVPKGDRSGTVIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDI 417
            L VP GDR G VIEP LTDQWYV    LA+PA+ AVE+G IQFVPKQYENMYFSWMRDI
Sbjct: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420

Query: 418 QDWCISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKHNLGADIALQQDNDVLDTWFSSG 477
           QDWCISRQLWWGHRIPAWYDE G V+VGR+E EVRA++N+ AD+AL+QD+DVLDTWFSS 
Sbjct: 421 QDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSA 480

Query: 478 LWTFSTLGWPQQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKT 537
           LWTF TLGWP++T  LK FH TDVLVTGFDIIFFWVARMIM+TMH  K+EDG  QVPFKT
Sbjct: 481 LWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKT 540

Query: 538 VYVHGLVRDGQGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTSGLMQPKLAKKIEKQTRD 597
           VYV GL+RD  G KMSKSKGNVLDP+D+IDGIDLE+LV KRT  +MQP+LA KIEK TR 
Sbjct: 541 VYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRK 600

Query: 598 EFADGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVL--DKGED 655
            F +GI +YGTD+LRFT  ++ASTGRDI +DM R+EGYRNFCNK+WNA+RYVL   + +D
Sbjct: 601 TFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQD 660

Query: 656 CG-QNGEAYELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLEL 714
           CG   G   E SLAD+WI SQ +    E    +D FR D+AA  LYEFIWNQ+CDWYLEL
Sbjct: 661 CGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLEL 720

Query: 715 SKPVLWDENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRLAPLA-GIEGKTI 773
           +KPVLW       +QR TRRTL+ VLE  LRLAHP +P+ITE IWQ + PL  G+EG TI
Sbjct: 721 TKPVLW--KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTI 778

Query: 774 MLQPWPVANEARIDEAAESDIEWLKTLMMGTRNIRAEMNIGPGKPLAVFVKNASAEDQRR 833
           MLQ  P  + A  ++ A  DIEW+K  +   RN+RAE +I PGKPL V +K A+ +D  R
Sbjct: 779 MLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDAAR 838

Query: 834 LTENDPLLKKLAKLESITVLAADAEAPLSATALVGEMEVLVPMAGLIDKGAELARLDKEI 893
           +  N P+L  LAKLESI VLA     P  ATALVG+ E+++PMAGLIDK AEL RL KEI
Sbjct: 839 IEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLAKEI 898

Query: 894 GRLQGEVQRVGGKLSNAAFVDKAPAEVIEKERAKLAEAEQALGKLAEQHARISSL 948
            + QGE+ R+ GKL N  FV KAP  VI KER KLA  ++AL KL +Q A I++L
Sbjct: 899 AKTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLEQQKATIAAL 953