Pairwise Alignments

Query, 338 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 264 a.a., RlmF-related methyltransferase from Methanococcus maripaludis S2

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 16/179 (8%)

Query: 47  IKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYGIQHWDIPADYLCPPVPGR 106
           I    +L  FV+    GK  IDF + +A++ +N A+L   +G+   D   D L P    R
Sbjct: 16  ILVNEKLKDFVVYKS-GKPRIDFKNKEAMKEYNIAILGHVFGLD-MDFHEDALIPTPINR 73

Query: 107 ADYVHFLADLLASTNDGKIPRGSIVKVLDIGMGANCVYPLIGYMEYRWNFLGSEVDPIAV 166
             ++  + D           +  I  VL+IG G+  +  LI    +  N   ++     +
Sbjct: 74  YLFIKNIFD----------EKDDIKDVLEIGTGSGIISILIA-KYFECNVTATDTVSDYL 122

Query: 167 AAARAIVQSNDLSKVIQLRQQTNPKQILLGLLE-PGERFDLTMCNPPFHASMDEATKGS 224
             A+  +  N+L+  I L       +I+  + E   ++FDL +  PP++A    A+K S
Sbjct: 123 KIAKDNISKNNLTSKINLIDSKG--KIIFDIPELKNKKFDLIISYPPYYADNSVASKRS 179