Pairwise Alignments

Query, 524 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 555 a.a., PepSY-associated TM helix (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (331), Expect = 4e-35
 Identities = 116/482 (24%), Positives = 208/482 (43%), Gaps = 36/482 (7%)

Query: 12  LHTWAGLIFGWLLFAIFLTGTLAYFKDEISHWMQPEVQ---ARALDDARSLTAAQTYLQQ 68
           +HTW G++ G  LF  F  G +  FK+ ++ W  P +    A +LDDA  L  +     +
Sbjct: 12  VHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDALPLIISTL---R 68

Query: 69  VAPTAARWF-ITLPDSRDPGLSVMWQDKVDPGKRG--------NFIQKTLDPVTGQAVEA 119
            +P AAR F + L ++      + WQ   +  +          +F+    +    +    
Sbjct: 69  ASPEAAREFSLHLREAEHLPGRLEWQSPAEGAESHRHDTLGMEHFVAHPGEDGAARIEAV 128

Query: 120 RESMGGEFFYRFHFQLQMPHP--WGRWLSTIAAMVMFVALITGIITH-KKIFKDFFTFRP 176
             S   EF    H  + +P      RW+  + A +  +AL++G++     + KD F  RP
Sbjct: 129 APSKLAEFIDVLHRVVGLPFDSDTARWIMGVIACLYALALVSGVVLLVPTLVKDLFALRP 188

Query: 177 -RKGQRSWLDGHNAVGVLVLPFHLMITYSSLVI-FMSMVMPAPIIASYGNDTRAFFSEVF 234
            R  +R W D HN VG+  LPFHL++  ++ V  F   +        +     + +    
Sbjct: 189 GRNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRLASVWQAPS 248

Query: 235 PNTNNAPALGQPGTLLPLTPMYEQARAQWDGGHVGRVAVNNPSDVNASVNVFRAGSDSVV 294
           P          PG LLP   +  + RA        R+     +   A V V+   + ++V
Sbjct: 249 PAPPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVWGQDATALV 308

Query: 295 -HDFGSTVSFNGTTGELLRVS---GGQSLPAAIGGTFYGLHMGHFAGPVLRWLYFICGLA 350
               G  V+ +  +G ++      G QS      G+F+ LH   + G  ++W+YF+ GLA
Sbjct: 309 SRPAGGFVAIDPYSGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKWMYFLLGLA 368

Query: 351 GTAMIGTGLVIWLGKRQLKHAKAAAMPFELR----LVEVLNI----ASMSGLMIAIAAFF 402
           G  +  +G ++W+  R+    +  A P   R    ++  L++      +SGL + I A  
Sbjct: 369 GAWLFYSGNLLWIESRRKTQRRGEATPPRQRRDTTVMAALSVGVCLGCLSGLSLTIVAGK 428

Query: 403 WANRLLPVSFAERSDWEVQTFFIAWGLSLLHAVLRRGRQGWVEQLSIGALLFSAIPLLNA 462
           W + ++    ++ + W    ++  +  S+  A LR   +  V+ L +  L  +AIPL + 
Sbjct: 429 WLHGVV----SDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIPLTSG 484

Query: 463 LT 464
           L+
Sbjct: 485 LS 486