Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  172 bits (436), Expect = 9e-48
 Identities = 99/284 (34%), Positives = 151/284 (53%), Gaps = 7/284 (2%)

Query: 16  FSCAARHLSFTRCAEELHITPGAVSQQIRQLEERLGFRLFHRRARGVELSAEGQRLAATV 75
           F  AARHLSFTR AEEL +T  AVS QI+ LE+ LG +LF R+ R + L+ EGQ     +
Sbjct: 14  FEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLTEEGQSYFLDI 73

Query: 76  GEAYGSIDAELQRLDAGMISGTLRLRSIPSFLGKWLTPRLPRLQQRFPDIQLRMVAEDSS 135
            + +  +     RL A    G+L +   PSF  +WL PRL +  ++ P+I +R+ A D+ 
Sbjct: 74  KDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKNPEIDVRIKAVDTE 133

Query: 136 IALHEGDFDLAIDLNDGSYPGLLSTALLDEQIFPVCAPSLLRGRPPLHGPADLVHFPLLH 195
            +    D D+AI    G++PGL +  L +E + PVC+P LL G  PL  P DL H  LLH
Sbjct: 134 ASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPLSKPEDLKHHTLLH 193

Query: 196 DITAWRGSYEYAEWEFYLNAIGYHHADVRRGHTFNRNHLTIEAAIAGMGVAIARRTLLND 255
           D++         +W+ +    G    +V +G  F+ + L ++AA  G GVA+    L   
Sbjct: 194 DMSR-------HDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGVALGYSVLARP 246

Query: 256 ELERGTLIVPFGLAVPNYKRYVLLYAPGALSHPGVRAVHDWLVE 299
           +++ G L+ PF   + +   Y L+          V A  +W+++
Sbjct: 247 DIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLD 290