Pairwise Alignments

Query, 505 a.a., chromosomal replication initiation protein from Pseudomonas simiae WCS417

Subject, 460 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  351 bits (900), Expect = e-101
 Identities = 208/509 (40%), Positives = 288/509 (56%), Gaps = 57/509 (11%)

Query: 1   MSVELWQQCVELLREELPAQQFNTWIRPLQ-VEAEGDELRVYAPNRFVLDWVNEKYLSRV 59
           M+ + W      L + +    + TWI PL+  +  G  +R  AP+ FV +WV   Y   +
Sbjct: 1   MTEDTWGSVQNDLLKTVGQNNYLTWIEPLKFADCRGGVVRFEAPSSFVGNWVARNYREDI 60

Query: 60  LELLDEHGNGLAPVLSLLIGSKRSSAPRAAPNAPLAAAASQAQAAAAPAVSAPSPAPAPS 119
           L  L   G          +  KR     A     LA AA Q +         PSP     
Sbjct: 61  LHHLVSAG----------VEVKRIEFDVAK----LAQAARQVRPKGTERTMTPSPGDVAM 106

Query: 120 KSSAQKNAPENEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENF 179
                               P+  A+ Q AP                   L+   TF NF
Sbjct: 107 DK------------------PVPSASLQSAP-------------------LDPRLTFSNF 129

Query: 180 VEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYL 239
           V GK N+LA A+A +VA+     +NPLFLYGGVGLGKTHLMHA+      +NP  KV+YL
Sbjct: 130 VVGKPNELAHASARRVAEGGPVSFNPLFLYGGVGLGKTHLMHAIAWEAQARNPGLKVLYL 189

Query: 240 HSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGG 299
            +E+F+   V+AL+     EFK  +RSVD L++DD+QF A K+ +Q+EFFHTFNAL++  
Sbjct: 190 SAEQFMYRFVRALRDRNTMEFKELFRSVDLLMVDDVQFIAGKDSTQDEFFHTFNALVDQN 249

Query: 300 QQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKK-----ADQAKVD 354
           +Q+I+++DR P EI+GLE+R+KSR   GL V + P + E R+ +L ++     A    + 
Sbjct: 250 KQIIISADRAPGEIDGLEDRIKSRLSCGLVVDIHPTDYELRLGVLQQRLQDQIAAGETIA 309

Query: 355 LPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSV 414
           +       +AQRI +NVR LEGAL R+IA S  +GR IT++L  E+L DL+   DK V+V
Sbjct: 310 VEDGVLECLAQRISTNVRVLEGALNRLIAFSDLVGRRITLDLAHEALSDLIRAHDKKVTV 369

Query: 415 DNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTT 474
           D I + VA+YY ++++DLL  RR+R++ARPRQ+AM L+K LT  SLPEIG  FGGRDHTT
Sbjct: 370 DEIMQAVAKYYNLRMTDLLGPRRTRTIARPRQLAMYLAKTLTTRSLPEIGRRFGGRDHTT 429

Query: 475 VLHACRKINELKESDADIREDYKNLLRTL 503
           V+HA ++I  L +SD  I ED ++LLRTL
Sbjct: 430 VIHAVKRIEALCDSDPQISEDVRSLLRTL 458