Pairwise Alignments

Query, 436 a.a., Histidyl-tRNA synthetase (EC 6.1.1.21) from Variovorax sp. SCN45

Subject, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

 Score =  141 bits (355), Expect = 4e-38
 Identities = 125/424 (29%), Positives = 196/424 (46%), Gaps = 48/424 (11%)

Query: 9   KGMNDILPPESARWEWLEATVRDLMGRFAYRNVRTPILERTALFVRGIGEVTDIVEKEMY 68
           KG  D LP E  + + +E  +R +   + +  + TP  E   L  +  G   D +  +++
Sbjct: 6   KGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTG---DEIRTQLF 62

Query: 69  SFEDRADKHGKFEHLTMRPENTAGLVRAVIEHNMLYEGPKRLWYTGPMFRRENVQRGRFR 128
            F D  D+      + +RPE T+ + R  I        P +L+Y    FR EN Q GR+R
Sbjct: 63  VFRDHGDRE-----MGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYR 117

Query: 129 QFHQIGAEALGFAGPDVDAELILLANALWKAIGLTDVRLELNSLG---QPAERALHRTEL 185
           +F Q+G+E +G   P  DAE++ +A    K I + D  + +  LG      E+     + 
Sbjct: 118 EFWQMGSELIGSKKPIADAEVVNMAIEGLKEINM-DFEIHIGHLGVLKGVFEKYNLSDDE 176

Query: 186 IAHFEKHADKLDEDGKR----RLHSNP--------LRILDTKNPAMKDVVE-SAPKLIDF 232
                +  DK D DG +    RL S            +LD K    K+V+     KL DF
Sbjct: 177 GNEIRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDLKGG--KEVIPILKEKLADF 234

Query: 233 LGAESLAHFEGLQAILKANDIAFTINPRLVRGLDYYNLSVFEFVTDRLGSQGTVCAGGRY 292
               S+A  E L +IL+     + IN  + RGLDYY   VFE    + G++  VC GGRY
Sbjct: 235 --ESSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVCGGGRY 291

Query: 293 DDLIAQIGGKPAPAVGWAMGVERVL----DLLKEQGAEVPAPVPDAYAIVPDAASMPVAL 348
           D+LI    G+P+PAVG+A G +R++    D   E  +    PV  +  ++ +       L
Sbjct: 292 DNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVENESIFVVPVKSSEMLLKE------CL 345

Query: 349 RTLQQLRESGVRVQMHAATVDGLSGFKAQ--MKKADASGATYALIFGADELARGEVTLKA 406
           +  + LR+SG  V++       L G K    +  A+       LI G +++  G+V+LK 
Sbjct: 346 KIAKTLRDSGKSVEV------DLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKN 399

Query: 407 LRDG 410
           +  G
Sbjct: 400 METG 403