Pairwise Alignments

Query, 424 a.a., (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) from Variovorax sp. SCN45

Subject, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (451), Expect = 3e-49
 Identities = 118/347 (34%), Positives = 181/347 (52%), Gaps = 48/347 (13%)

Query: 30  VTVGGDAPVRVQSMTNTDTVDAIGTAIQVKELALAGSEMVRITVNTPEAAAQVPYIREQL 89
           V +G  AP+ VQSMTNT T D   T  Q+K L   G+++VR++V T EAA     I++Q 
Sbjct: 22  VPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTMEAAEAFKLIKQQ- 80

Query: 90  DRMGVDVPLIGDFHYNGHRLLTDYPACAEALSKYRINPGNVGKGDKKDKQFGQMIDAAMR 149
               V VPL+ D H++    L       + L   RINPGN+G     + +   ++D A  
Sbjct: 81  ----VSVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIGN----EARIRSVVDCARD 129

Query: 150 WNKPVRIGVNWGSLDQELLASLMDTNSQRAQPWDAKQVMYEALITSAIESAKLAESMGMA 209
              P+RIGVN GSL+++L     +                EAL+ SA+    + + +   
Sbjct: 130 KGIPIRIGVNGGSLEKDLQLKYGEPTP-------------EALVESAMRHVDILDRLNF- 175

Query: 210 GNQVILSCKVSGVQDLISVYRELARRCEYPLHLGLTEAGMGTKGTVASATALSILLQEGI 269
            +Q  +S K S V   +  YR LA++ + PLHLG+TEAG    G+V SA  L +LL EGI
Sbjct: 176 -DQFKVSVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGI 234

Query: 270 GDTIRVSLTPQPGESRTQEVLIANEILQALGLRVFVPSVTACPGCGR---TTSTTFQELA 326
           GDT+R+SL   P     +E+ +  +IL++L +R    +  ACP C R       T   L 
Sbjct: 235 GDTLRISLAADP----VEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALE 290

Query: 327 KQIDDYLRMQMPVWRKKYPGVETLKVAVMGCIVNGPGESKHADIGIS 373
           ++++D L                + V+++GC+VNGPGE++ + +G++
Sbjct: 291 QRLEDVL--------------TPMDVSIIGCVVNGPGEAEVSHLGLA 323