Pairwise Alignments

Query, 321 a.a., Cytoskeleton protein RodZ from Variovorax sp. SCN45

Subject, 336 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 89/335 (26%), Positives = 137/335 (40%), Gaps = 40/335 (11%)

Query: 12  AAQPLEEGDITHKTAGDLLREAREAHGLHIEMVAAALKVPPQKLLALEADDIASLPDPVF 71
           A +P E G+    T G  L+ ARE+  + +  VA  L + P  +  LEAD+  ++    +
Sbjct: 13  AEKPKEAGE----TLGQWLKAARESRQMTLASVAEQLNLRPSIVQDLEADNYDNIASATY 68

Query: 72  ARALASSVCRALRIDPAPVLAKLPTTQKVSLAAADRTLKTNISSGTPRWAGNGRSSGGLP 131
            +    +  R L ++ A V A L  +  V  A   ++     S  T R A +GR    L 
Sbjct: 69  VKGYVKNYARILGLEMAKVDAYLAESFPVVSAPTMQSF----SRKTTRQARDGRLM--LV 122

Query: 132 SRALLTVVVLLLIGAGALFWLPQSVF----DQLGASVSRL----TAHGSADTPATNDASA 183
           +  ++ V++ LL+    L+W+ +S      D    SV       T   S++     D  A
Sbjct: 123 TYLIIFVLLALLV----LWWVQKSAMVADLDLSKPSVEETAELSTLPASSEPMLAQDPQA 178

Query: 184 GT----PGGSGVVAETVPAQAVAPSGSVGAAVETPVAANPANATTPVA--TAPAAVA--- 234
           GT    P       +TV  QAV        +    +    A    P A  T    VA   
Sbjct: 179 GTGIEMPREQAAPDQTVSDQAVPDQTMAEESTSAQLTGEQAEDLAPEAGSTPETGVALEV 238

Query: 235 --------PAASAASSQQLVFVAREECWITVTEAGGKQLLRRSLQAGETVGLSGALPLSV 286
                    A  +A    L      +CWI VT+A GK L+     AG+ + + G  P  V
Sbjct: 239 TNQNSQADEALKSADDAVLALSLSGDCWIKVTDADGKVLVNGLKLAGKEMNVFGQAPFKV 298

Query: 287 VVGRASSVDVQVRGKPFDLKPVTKSGGVARFEVTS 321
           ++G   S+ +++ G+  DL     SG VAR  V S
Sbjct: 299 ILGAPQSLTMRLNGEQVDLAKY-PSGRVARLTVGS 332