Pairwise Alignments

Query, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

Subject, 262 a.a., fimbrial biogenesis and twitching motility protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  116 bits (290), Expect = 6e-31
 Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 10/250 (4%)

Query: 28  LLAGCVSTRTTTTSLADTSSGKGVDIVTESDESSRQRRARLRMELASGYFEQGQTNVALD 87
           L+ GCV+ +T +          G DI        +   A+ R +L   Y ++G T  A  
Sbjct: 17  LVTGCVTEQTYS----------GTDIPVSERTFDKVAAAKERTQLGLTYLQRGNTEQAKF 66

Query: 88  EIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYGWLLCQQ 147
            + +A+A  P+  + +      Y  + D    E+++R A+  N    ++ +N+G  LCQQ
Sbjct: 67  NLDKAMAYAPHLEEVHVAMAYFYQTVGDVPRTEEAYRNAVRSNDASGDSMNNFGVFLCQQ 126

Query: 148 NRYGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDASNPVVG 207
            RYG+A   F +A+  P Y   A +    G+C   AGQ  +A      A + D       
Sbjct: 127 KRYGEAEEMFLKAINQPKYTRTASSYENLGLCSRDAGQIEKARHYFDMALKYDPRRATSL 186

Query: 208 FNLALVLAQREEWSRAQFYIRRVNNSPSASAETLWLGIKIERKLNNREALAQLGGQLQRR 267
             +  +    +++  A+  + R+++    SA +L LG++IER+LNNR+A ++ G  L  +
Sbjct: 187 LEMTEIAMDSKDFQGAKRMLERLHSVIPESASSLALGVEIERQLNNRDASSRYGIMLLAK 246

Query: 268 FPQSREASAY 277
           FP S EA  Y
Sbjct: 247 FPASPEAKEY 256