Pairwise Alignments

Query, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

Subject, 262 a.a., type IV pilus biogenesis/stability protein PilW (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (278), Expect = 1e-29
 Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 10/255 (3%)

Query: 23  VAVTFLLAGCVSTRTTTTSLADTSSGKGVDIVTESDESSRQRRARLRMELASGYFEQGQT 82
           +  + L++GCV+ RT +          G D+  +         AR R++L   Y ++G +
Sbjct: 13  ILTSALMSGCVTERTYS----------GTDVPVQERTFDNVSAARQRVQLGLTYLQKGNS 62

Query: 83  NVALDEIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYGW 142
             A   + +AL   PN  D +      Y  + +  + E ++R AI  +    ++ +N+G 
Sbjct: 63  EQAKYNLDKALEFAPNIEDVHVALAYYYQSVGELELTEKAYRNAINASDASGDSMNNFGV 122

Query: 143 LLCQQNRYGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDAS 202
            LCQQ +Y  A   F  A+ +P Y   A +    G+C  K+G   +A+R  + A   D  
Sbjct: 123 FLCQQAKYDQAEEMFLRAVKMPKYTRSASSYENLGICSRKSGDLQKAQRYFEMALNYDPR 182

Query: 203 NPVVGFNLALVLAQREEWSRAQFYIRRVNNSPSASAETLWLGIKIERKLNNREALAQLGG 262
                  L+ +      +S A+  + R +     SA++L LGIKIE+ LN+ EA+ + G 
Sbjct: 183 RANSLLELSEIELDLGNYSAAKKGLARYHRVVPESAQSLALGIKIEQGLNDPEAMRKFGI 242

Query: 263 QLQRRFPQSREASAY 277
            L  +FP S EA  Y
Sbjct: 243 LLLAKFPASNEAKQY 257