Pairwise Alignments

Query, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

Subject, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 70  MELASGYFEQGQTNVALDEIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAI 129
           +  A+  +E G    A  E K+A+A +P NS+ +N  G +   L+  G AE  F++A+A+
Sbjct: 412 LSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVAL 471

Query: 130 NPRDPNTRHNYGWLLCQQNRYGDAATQFNEALAV-PSY 166
           +  +    +N    L +  +Y +A   + +A+ + P Y
Sbjct: 472 DGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDY 509



 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 115 DAGMAEDSFRRAIAINPRDPNTRHNYGWLLCQQNRYGDAATQFNEALAVPSYADRAKTLM 174
           D   A+  +++AIA+NP +    ++YG LL    +YG+A  +F +A+A+     +A   +
Sbjct: 423 DFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNL 482

Query: 175 TRGVCELKAGQRAQAERTLQQAYEIDASNPVVGFNLALVLAQREEWSRA 223
              +   K+ +  +AE   ++A EI        +NLA + A  + +  A
Sbjct: 483 ATFLA--KSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEA 529



 Score = 35.8 bits (81), Expect = 2e-06
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 88  EIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYGWLLCQQ 147
           E K+A+A D +NS AYN       + +    AE+ +++AI I P      +N   +    
Sbjct: 464 EFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAAL 523

Query: 148 NRYGDAATQFNEALAV 163
            RY +A  Q    + +
Sbjct: 524 KRYDEAVAQVKSMVKI 539