Pairwise Alignments

Query, 599 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 411 a.a., Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  258 bits (659), Expect = 3e-73
 Identities = 171/407 (42%), Positives = 225/407 (55%), Gaps = 32/407 (7%)

Query: 197 KLHKVLAQAGLGSRLEMEQLILQGRISVNNEPAHIGQRIQYGDQVKINGKPI-RYRIAPP 255
           KL KVLA+ G+GSR ++E  I QGRI VN + A +G R+   D + I+GK I R   A  
Sbjct: 18  KLQKVLARIGVGSRRDVEAWITQGRIKVNGKDAILGLRVDMHDAITIDGKVIKREEAAET 77

Query: 256 PPRVIAYHKPTGEVVTHDDPQNRPTVFRKLPRLQQGKWQSVGRLDLNTEGLLLFSSSGDL 315
             RVI Y+KP GE+ T DDP+ RPTVF K+PR ++G+W ++GRLD+NT GLL+F++ G+L
Sbjct: 78  VRRVIMYNKPDGEICTRDDPEGRPTVFDKMPRPKEGRWINIGRLDINTTGLLMFTTDGEL 137

Query: 316 ANQLMHPRFGLEREYAVRVLGALTSEEKQKLLDGVRLDDGMAQFGTIEDG-GGEGSNCWY 374
           AN+LMHP + ++REYAVRV G +  E  ++L  GV L+DG A+F  I+   GGEG N WY
Sbjct: 138 ANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPARFTDIKQAPGGEGFNHWY 197

Query: 375 RVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKRGAWMELDERDIRALFQAS 434
              + EGRNREVRRL+ES G  VSRL R+R+G + L   L  G W E+ + ++  L  A 
Sbjct: 198 HCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGRWREMSQYEVDIL-AAE 256

Query: 435 GGAAARPGPQQRGPGQD---------GGGNGRNGRNKKRRGNRNGGGQGGGQPREMRDDG 485
            G      PQ     +D             G+  R +  R    G   G   PR  R+  
Sbjct: 257 VGLKPVAMPQMTAKSKDKLERMQRKSSRPMGKTERVRTLRPAAEGAPTG---PRPSREPQ 313

Query: 486 GRGEAPI--PNPLGDGRPPRGDRGPRPNRGGGNGGNG-GQPQGQGRRGKGGGNRQGDDRQ 542
             GE P   P P  DG   RG R PRP  G    G G G P G   RG    +R  D ++
Sbjct: 314 IEGERPARKPAPRQDGE--RGPRTPRPANGRTERGEGRGAPAG---RGTPVADRPADTKR 368

Query: 543 PSGANQPDPMKTSLGYIGADSFSRQRKEQRGGPGRRGGGGGGGSGFG 589
           P+   +P P K   G + AD  +   K +RG P     G G   GFG
Sbjct: 369 PA---KPAPKKRP-GIVLADRDAPSGK-RRGAP----AGSGQRPGFG 406