Pairwise Alignments

Query, 599 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

 Score =  229 bits (583), Expect = 2e-64
 Identities = 123/238 (51%), Positives = 166/238 (69%), Gaps = 2/238 (0%)

Query: 195 SPKLHKVLAQAGLGSRLEMEQLILQGRISVNNEPAHIGQRIQYGDQV-KINGKPIRYRIA 253
           S KL KVLA+AG GSR E+E LI  GR+SVN + A +G+R++  + V +I+G  +  +  
Sbjct: 2   SEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQ 61

Query: 254 PPPP-RVIAYHKPTGEVVTHDDPQNRPTVFRKLPRLQQGKWQSVGRLDLNTEGLLLFSSS 312
                RV+AY+KP GE+ T  DP+ R TVF +LP+++  +W SVGRLD NT GLLLF++ 
Sbjct: 62  EEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTD 121

Query: 313 GDLANQLMHPRFGLEREYAVRVLGALTSEEKQKLLDGVRLDDGMAQFGTIEDGGGEGSNC 372
           G+LAN+LMHP   +EREY VRV G +T E+ + L+ GV+L+DGMA+F  +   GGEG N 
Sbjct: 122 GELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINH 181

Query: 373 WYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKRGAWMELDERDIRAL 430
            + V I+EGRNREVRRL+ES G  VSRL R+RYG + L + L RG WMELD + +  L
Sbjct: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYL 239