Pairwise Alignments

Query, 599 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase B from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 6e-30
 Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 16/288 (5%)

Query: 150 AEREQRNALPPEPIRFADVISGQFDADEESPEVPPLKRVLLPEADSPKLHKVLAQAGLGS 209
           +E  + N+   E ++     + +   DE++ E+P  KRV L  A        L++ G  S
Sbjct: 46  SEEARSNSAETETVKQRRPTAKRRVGDEKAGELPG-KRVTLARA--------LSKLGYCS 96

Query: 210 RLEMEQLILQGRISV-NNEPAHIGQRIQY-GDQVKINGKPIRYRIAPPPPRVIAYHKPTG 267
           R + E+LI +GR+SV   +   +   +    D++ ++G  I    A      +  +KP G
Sbjct: 97  RTQAEKLIAEGRVSVAGRKITDLSHWVDIEADRIAVDGTVI----AAQARVYLMLNKPRG 152

Query: 268 EVVTHDDPQNRPTVFRKLPRLQQGKWQSVGRLDLNTEGLLLFSSSGDLANQLMHPRFGLE 327
            V T DDP+ RPTVF  L  +       VGRLD  +EGLLLF++   LA +L+ P   L 
Sbjct: 153 LVTTRDDPEGRPTVFSCLDNVDVPSLSPVGRLDKASEGLLLFTNDTVLAQRLLDPETHLG 212

Query: 328 REYAVRVLGALTSEEKQKLLDGVRLDDGMAQFGTIEDGGGEGSNCWYRVTISEGRNREVR 387
           + Y V+V G        ++++GV     + +   +E   G   N W  + + EGRNR++R
Sbjct: 213 KVYHVQVRGIFGEAMAARMVEGVTEGGELLRALRVERLKGGDRNSWIEIELDEGRNRQIR 272

Query: 388 RLFESVGHAVSRLIRIRYGAMVLPRGLKRGAWMELDERDIRALFQASG 435
           R+ + +G    RL+R+  G + L   L +GA   L E +   L + +G
Sbjct: 273 RMLDVLGFECLRLLRVSIGEIRL-GDLPKGASRPLTEAEALYLRRRTG 319