Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 186 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 68.2 bits (165), Expect = 8e-17
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 8/142 (5%)

Query: 24  LERIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAYLLRMAANIATD--QYRQNN 81
           + R++GS D+AAD  QET++R             +     +LL++A N A D  + RQ +
Sbjct: 35  IRRLLGSTDEAADLTQETFIRAYQALPRWRPEARLQT---WLLQIARNAALDLLRQRQRH 91

Query: 82  VLLVHGEIDELMHIVDEVSDPERIASARSDVQALSQVLGRMPRRRREILVAARVEGQLND 141
           V+L     DE    +D    P R   +  D++ L ++L R+P  +REIL+   VEG   D
Sbjct: 92  VVLA---ADEQAEPIDPAPSPLRRLQSARDLEMLERLLARLPHEQREILLLREVEGLSYD 148

Query: 142 EIARRFDVSLSTVEKELRAALE 163
           E+A    ++  TV+  L  A E
Sbjct: 149 ELAATLQLNAGTVKSRLARARE 170