Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 168 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 61.2 bits (147), Expect = 9e-15
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 8/163 (4%)

Query: 6   SSTLRARM-VARYVELRSKLERIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAY 64
           S +L +R+ +  Y E+   L    G R  A D  Q+ W +L     + +    V+N  +Y
Sbjct: 4   SDSLLSRIYLENYREIVDFLSLRTGCRHAAQDCAQDCWFKLCKARPAEA----VDNGRSY 59

Query: 65  LLRMAANIATDQYRQNNVLLVHGEIDELMHIVDEVSDPERIASA--RSDVQALSQVLGRM 122
           + R+AANIA D +R N   L   + D         + P+ + +   R +++ L  ++  +
Sbjct: 60  VFRVAANIAVDWHRSNGREL-RLQADYAASGDPTATSPDTLETVQQRRNLERLEAIIRAL 118

Query: 123 PRRRREILVAARVEGQLNDEIARRFDVSLSTVEKELRAALEFC 165
           P R  E+ V  R+EG    E A+R  +S S VEK +   L  C
Sbjct: 119 PPRTVEVFVLNRLEGLTYTETAKRLGISASAVEKHIARVLLQC 161