Pairwise Alignments

Query, 846 a.a., Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 1e-26
 Identities = 72/253 (28%), Positives = 139/253 (54%), Gaps = 13/253 (5%)

Query: 571 IATDITPRRDAEEQAAAQADKAQAASRLITMGEMASSVAHELNQPLTAITNYCNGMMSRI 630
           +  ++  R+ AE        +   A+++  +G+  +S+AHELNQPL+A++ Y     +R+
Sbjct: 534 LQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYL--FSARL 591

Query: 631 KGQTIDTEALLAALEKTSKQAQRAGQIIQRIRSFVKR--SEPNRTPADVATMVSEAVELA 688
             +      L  +L+      +R G+I+  +R F ++  S+ +  P  + ++V +A+ L 
Sbjct: 592 ALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNSVVEQALVLV 651

Query: 689 GIELRRRNVRLNHYVAARLPVVRVDPILIEQVMVNLLKNAAESIDIADRPLARRSVELRV 748
             + +R+ ++L + +   L +V  D + +EQV++NL+ N  +    A    A+  V+L  
Sbjct: 652 QTKAKRQQIKLINTLPDDL-MVMADALSLEQVLINLIVNGCD----ASTTFAQPWVKLIA 706

Query: 749 LPKVIEGHNAIEFSVQDTGKGLAPEVMDRLYEAFFSTKPEGMGIGLNLCRTIVESHRGRM 808
           L    +G   I  +V D+G+G   EV+D+L+  F +TK  G+G+GL++C+++VE  +GR+
Sbjct: 707 LGTE-QGMQRI--AVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRI 763

Query: 809 Q-AENIYNGPDVI 820
             A N+  G  VI
Sbjct: 764 ALASNLEKGAMVI 776