Pairwise Alignments

Query, 846 a.a., Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  150 bits (380), Expect = 3e-40
 Identities = 122/435 (28%), Positives = 207/435 (47%), Gaps = 21/435 (4%)

Query: 399  GRALPGGFQVRVKRKNGSVFNARLYVSPLIDARGHQTGWMTSMTDITEPTRIREQLSASY 458
            G+     F+ R+K  N     AR    PL  A G    W  +  DI E  R +E L    
Sbjct: 805  GQPFVNRFRRRLKDGNYRWIEAR--AQPLRRADGPIVQWYFASIDIEEEMRAQEALRERE 862

Query: 459  ERFTTVLEALDAAVSVAPIGSEELLFANKLYRLWFGSDTVGHLGMVAQAGVPAS---NAH 515
                 ++E L A +  A    E +  + +L R + G + +  L   A++ + A+     H
Sbjct: 863  RFLWQLVETLPAMIDCAAPNGEPVYRSQQL-RDFLGYE-LEELDGGAKSRLDATLDAGVH 920

Query: 516  DEGLDDVDPYAGLPIDTLTAAQTANNEIFVPHLGKWLEVRSRYLTWVDGRLAQL-VIATD 574
             + L  V       +++    +  +         +W+E R+  +    G + Q  VI  D
Sbjct: 921  PDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMRDEKGAIVQWNVICLD 980

Query: 575  ITPRRDAEEQAAAQADKAQAASRLITMGEMASSVAHELNQPLTAITNYCNGMMSRIKGQT 634
            +      +E+     ++   A +  ++ E+++S+AHE+NQPL AI    +     +    
Sbjct: 981  VDREVRMQEELRLAQERLARAGQAASLAELSASIAHEVNQPLAAIVANSHACYRWLSADP 1040

Query: 635  IDTEALLAALEKTSKQAQRAGQIIQRIRSFVKRSEPNRTPADVATMVSEAVELAGIELRR 694
            ++ E      E+  + A+ A  ++ RIR+  K+S  NR    ++ ++SEA  L   E  R
Sbjct: 1041 VNIERAKITTERVIRDAKSAADVVSRIRALFKQSVENRGILVLSDVISEACSLVAAEALR 1100

Query: 695  RNVRLNHYVAARLPVVRVDPILIEQVMVNLLKNAAESIDIADRPLARRSVELRVLPKVIE 754
            R +RLN  V   L  V VD I ++QV+VNL++N  E++D  D     ++V++R    + +
Sbjct: 1101 RRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAVD---DNKTVDVR----MHQ 1153

Query: 755  GHNAIEFSVQDTGKGLAPEVMDRLYEAFFSTKPEGMGIGLNLCRTIVESHRGRMQAENIY 814
              + +   + D G G+A    +R++E FF+TK  GMG+GL + R+IVE+H GR+ AE   
Sbjct: 1154 VDDEVRIEIGDNGNGVA--FPERIFEPFFTTKENGMGMGLAISRSIVEAHGGRLWAEK-- 1209

Query: 815  NGPDVIGCRFSFWIP 829
            N P   G RF F +P
Sbjct: 1210 NEPR--GARFVFTLP 1222



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 37/194 (19%)

Query: 409 RVKRKNGSVFNARLYVSPLIDARGHQTGWMTSMTDITEPTRIREQLSASYERFTTVLEAL 468
           R++R +G          P+ D  G    W     DI +   + E L  S ++   ++EA+
Sbjct: 685 RLRRADGVYRWVEGSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAV 744

Query: 469 D-AAVSVAPIGSEELLFANKLYRLWFGSDTVGHLGMVAQAGVPASNAHDEGLDDVDPYAG 527
             + +S AP G  EL + +K Y+               QAG P +   D   D +     
Sbjct: 745 PFSTLSFAPTG--ELTYVSKRYQ--------------DQAGAPGAEIKD--FDALAREVA 786

Query: 528 LPID--TLTAAQT---ANNEIFVPHLGK--------WLEVRSRYLTWVDGRLAQLVIATD 574
            P D  T+ A  T   A  + FV    +        W+E R++ L   DG + Q   A+ 
Sbjct: 787 HPDDFPTMFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFAS- 845

Query: 575 ITPRRDAEEQAAAQ 588
                D EE+  AQ
Sbjct: 846 ----IDIEEEMRAQ 855



 Score = 27.3 bits (59), Expect = 0.006
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 403 PGGFQVRVKRKNGSVFNARLYVSPLIDARGHQTGWMTSMTDITEPTRIREQLSASYERFT 462
           P   + R++R +G+         PL D  G    W     DI +  R++E L  S  R+ 
Sbjct: 390 PYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYR 449

Query: 463 TVLEALDAAVSVAPIGSEELL 483
            +   +   + +A I + +L+
Sbjct: 450 ELFHYM--PIGLAQIDAGKLI 468