Pairwise Alignments

Query, 359 a.a., Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) from Variovorax sp. SCN45

Subject, 339 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  333 bits (854), Expect = 4e-96
 Identities = 175/342 (51%), Positives = 223/342 (65%), Gaps = 9/342 (2%)

Query: 10  YGLARPFLFGFDPEHAHELTLDGLARTQNTPLACAYSAPRVSDPIQLAGLSFPNRVGLAA 69
           Y +A+  +F  DPE AH L +  L  T N PL   Y+      P+   GL+FPN VGLAA
Sbjct: 3   YKIAQKVMFQMDPERAHNLAIGSLRMTGNGPLNAFYAQNITPAPVSFMGLTFPNPVGLAA 62

Query: 70  GLDKNARCIDAFAAMGFGFVEVGTVTPKGQPGNPKPRMFRLPQRDALINRLGFNNEGLEA 129
           G+DK+   IDAF AMGFG VEVGTVTP+ QPGN  PR+FRL    A+INR+GFNN+G++ 
Sbjct: 63  GMDKDGESIDAFHAMGFGHVEVGTVTPRPQPGNDLPRLFRLKPAKAIINRMGFNNKGVDN 122

Query: 130 FLANVQKARFRKAGGAAKQPMLLGLNIGKNAATPIERAVDDYLACLDGVYPHADYVTINI 189
            + N+          A K  +++G+NIGKN  TP+E+  DDYL C+D VY HA Y+ +NI
Sbjct: 123 LVKNLI---------AKKTDIMVGVNIGKNKDTPVEQGKDDYLICMDKVYLHAAYIAVNI 173

Query: 190 SSPNTANLRSLQSDEALDALLGAVAERREALATRHAKRSPLFVKIAPDLDETQVAVIAAT 249
           SSPNT  LRSLQ  + LD LL A+  ++  LA +H K  P+ +KIAPDL   ++  IA  
Sbjct: 174 SSPNTPGLRSLQYGDLLDELLSAIKAKQLELADKHKKYVPIALKIAPDLTIEEIENIAQA 233

Query: 250 LKRHGMDGVIATNTTLARDAVKGLPHAEEAGGLSGAPVREASNRVIAQLRAALGSGFPII 309
           L ++  DG IATNTTL RD V GL +A E+GGLSG P+ E S +VI QL   L    PII
Sbjct: 234 LIKNQFDGAIATNTTLTRDGVSGLANANESGGLSGKPLTELSTKVIKQLATCLQGQIPII 293

Query: 310 GVGGILSGADAKAKIAAGADVVQIYTGLIYRGPALVREAAQA 351
           GVGGI S  DA AK  AGA +VQIY+G IY+GP L++E  +A
Sbjct: 294 GVGGINSAEDALAKFDAGATMVQIYSGFIYQGPKLIKEIVEA 335