Pairwise Alignments

Query, 702 a.a., Excinuclease ABC subunit B from Variovorax sp. SCN45

Subject, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

 Score =  831 bits (2146), Expect = 0.0
 Identities = 418/667 (62%), Positives = 523/667 (78%), Gaps = 9/667 (1%)

Query: 33  FELFQPYPPAGDQPKAIEGLVEGVIDGEVFQTLLGVTGSGKTYTMANVIARLGRPAIVFA 92
           FEL   Y PAGDQP AI+ L+EG+  G   QTLLGVTGSGKT+T+ANVIA   RP I+ A
Sbjct: 5   FELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTIILA 64

Query: 93  PNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMRL 152
           PNKTLAAQLY E + FFP NAVEYFVSYYDYYQPEAYVP  D FIEKD+S+N HIEQMRL
Sbjct: 65  PNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQMRL 124

Query: 153 SATKSVLERRDTVIVATVSAIYGIGTPEDYMEMRLIARVGDKVGQRDLISRLIRMQYLRN 212
           SATK++LER+D VIVA+VSAIYG+G P+ Y++M L  R GD + QRD++ RL  +QY RN
Sbjct: 125 SATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQYSRN 184

Query: 213 EQDFARGTFRVRGDTIDVFPAEHSELAIRFELFDDEIESLQLFDPLTGRIRQK-VPRFTV 271
           +  F RG FRVRG+ ID+FPAE  + A+R E+FDDEIE + LFDPLTG I  + + RFT+
Sbjct: 185 DMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLARFTI 244

Query: 272 YPSSHYVTPRDKVMAAVETIKIELAGRLKELVGAGKLVEAQRLEQRTRFDLEMLAEIGHC 331
           YP +HYVTPR++++ A+E IK EL  R + L+   KL+E QR+ QRT+FD+EM+ E+G C
Sbjct: 245 YPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNELGFC 304

Query: 332 KGIENYTRHLSGAAPGDPPATLTDYLPKDALMFLDESHQMVGQLSAMYNGDRARKTTLVE 391
            GIENY+R+LSG A G+PP TL DYLP D L+ +DESH  V Q+ AM+ GDR+RK TLVE
Sbjct: 305 SGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKETLVE 364

Query: 392 YGFRLPSALDNRPLKMEEFEARVRQCIFVSATPAQYE-KDHAGNVVEQLVRPTGLIDPEV 450
           +GFRLPSALDNRPLK +EFEA   Q IFVSATP++YE     G V EQ+VRPTGL+DP +
Sbjct: 365 FGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLDPII 424

Query: 451 EVRPATHQVDDVLGEIRVRVEKNERVLITTLTKRMSEQLTDYLGDNGVKVRYLHSDVDTV 510
           EVRP   QVDD+L E R+R   +ER+L+TTLTKRM+E LT+YL ++GVKVRYLHSD+DTV
Sbjct: 425 EVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDIDTV 484

Query: 511 ERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAA 570
           ERVEI+RDLRLG FDVLVGINLLREGLD+PEV+LVAILDADKEGFLR+ERSLIQT+GRAA
Sbjct: 485 ERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMGRAA 544

Query: 571 RNLNGKAILYADRMTDSMKKAIDETERRRARQIAHNEANGITPRSIVKQVRDLIDGVYSE 630
           RN+NGKAILYAD +T SM+KAIDETERRR +Q+A+NE  GITP+ + + V+D+++     
Sbjct: 545 RNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMELGDIA 604

Query: 631 KTGKE-------MAKLDLERAKVEDMSEKDIAREIKRLEKQMLEHARNLEFEKAARVRDQ 683
           K+ K+       +AK+  E A  + ++ + + +EI +LE  M +HA+NLEFE AA+ RD+
Sbjct: 605 KSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQKRDE 664

Query: 684 LALLREQ 690
           +  LR+Q
Sbjct: 665 IHQLRQQ 671