Pairwise Alignments

Query, 702 a.a., Excinuclease ABC subunit B from Variovorax sp. SCN45

Subject, 666 a.a., excinuclease ABC subunit B from Synechococcus elongatus PCC 7942

 Score =  764 bits (1974), Expect = 0.0
 Identities = 381/664 (57%), Positives = 502/664 (75%), Gaps = 2/664 (0%)

Query: 31  SPFELFQPYPPAGDQPKAIEGLVEGVIDGEVFQTLLGVTGSGKTYTMANVIARLGRPAIV 90
           +PF+L   Y P GDQP AI  LVE V  G  +QTLLG TG+GKT+T+ANVIA++GRPA+V
Sbjct: 2   TPFQLQARYQPMGDQPTAIAQLVEQVQAGAPYQTLLGATGTGKTFTIANVIAQVGRPALV 61

Query: 91  FAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQM 150
            A NKTLAAQL +E REFFP NAVEYF+SYYDYYQPEAY+P  D +I K +SINE I+ +
Sbjct: 62  LAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYIPVTDTYIAKTASINEEIDML 121

Query: 151 RLSATKSVLERRDTVIVATVSAIYGIGTPEDYMEMRLIARVGDKVGQRDLISRLIRMQYL 210
           R SAT+++ ERRD ++VA++S IYG+G P +Y++  +   VG ++  R+++ +L+ +QY 
Sbjct: 122 RHSATRNLFERRDVIVVASISCIYGLGIPSEYLKAAIPLEVGAEINMREVLRQLVDVQYS 181

Query: 211 RNEQDFARGTFRVRGDTIDVFPAEHSELAIRFELFDDEIESLQLFDPLTGRIRQKVPRFT 270
           RN+ +  RG FRV+GD +++ PA + +  IR E F DEI++++  DP+TG I Q + R  
Sbjct: 182 RNDLESGRGRFRVKGDVLEIGPA-YEDRIIRVEFFGDEIDAIRYIDPVTGEILQSLDRLN 240

Query: 271 VYPSSHYVTPRDKVMAAVETIKIELAGRLKELVGAGKLVEAQRLEQRTRFDLEMLAEIGH 330
           +YP+ H+VTP +++  A+  IK EL  +L  L   GKLVEAQRLEQRTR+DLEML E+G+
Sbjct: 241 IYPARHFVTPEERLEIAIAEIKEELNQQLLTLQAEGKLVEAQRLEQRTRYDLEMLQEVGY 300

Query: 331 CKGIENYTRHLSGAAPGDPPATLTDYLPKDALMFLDESHQMVGQLSAMYNGDRARKTTLV 390
           C G+ENY RHL+G  PG PP  L DY PKD L+ +DESH  V QL  MYNGD++RK  LV
Sbjct: 301 CNGVENYARHLAGREPGSPPECLIDYFPKDWLLVVDESHVTVPQLRGMYNGDQSRKKVLV 360

Query: 391 EYGFRLPSALDNRPLKMEEFEARVRQCIFVSATPAQYEKDHAGN-VVEQLVRPTGLIDPE 449
           ++GFRLPSA DNRPLK EEF  +VRQCIFVSATP  +E + +   +VEQ++RPTG++DPE
Sbjct: 361 DHGFRLPSAADNRPLKSEEFWEKVRQCIFVSATPGDWEIERSEEQIVEQVIRPTGVVDPE 420

Query: 450 VEVRPATHQVDDVLGEIRVRVEKNERVLITTLTKRMSEQLTDYLGDNGVKVRYLHSDVDT 509
           V VRP   QVDD+L EI+ RV + ER LITTLTKRM+E LTDYL D GVKVRYLHS++++
Sbjct: 421 VFVRPTEGQVDDLLAEIQQRVRRQERALITTLTKRMAEDLTDYLSDRGVKVRYLHSEINS 480

Query: 510 VERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRA 569
           +ER+EIL+DLR G FDVL+G+NLLREGLD+PEVSLVAILDADKEGFLR ERSLIQTIGRA
Sbjct: 481 IERIEILQDLRNGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRTERSLIQTIGRA 540

Query: 570 ARNLNGKAILYADRMTDSMKKAIDETERRRARQIAHNEANGITPRSIVKQVRDLIDGVYS 629
           AR++NG+AILYADRMT+SM+KAI ETERRR  Q+ +N+ + ITP+ I+K+  + I     
Sbjct: 541 ARHINGQAILYADRMTESMEKAISETERRRRIQLDYNQRHNITPQPIIKRSSNAILSFLE 600

Query: 630 EKTGKEMAKLDLERAKVEDMSEKDIAREIKRLEKQMLEHARNLEFEKAARVRDQLALLRE 689
                   +L++  ++ +D+S ++I   I +LE QM E A+NLEFE+AA+ RD++  LRE
Sbjct: 601 VSRRLNKQELEVAVSQADDLSLEEIPNLITQLEAQMKEAAKNLEFEEAAQYRDRIKKLRE 660

Query: 690 QAFG 693
           +  G
Sbjct: 661 RLVG 664