Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 16/245 (6%)

Query: 17  AHFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTAGVSAQGFRMVML 76
           +H   H H+   +   L+G+ EF   G   I G G   ++     H  G       +++L
Sbjct: 42  SHMACHDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVGQSDILVL 101

Query: 77  YVPHAWAEARLGWPVGLR--GELLNGVWH---DAAMADALACAAR----SGDGVAVGRLL 127
            +P    +     P+ LR   EL  G  +   D  +   +    +    S D + +GR  
Sbjct: 102 NMPVPSDDD----PLLLRKLNELAVGDVYFQLDGQIQRLIQMLVQEMQASPDDLLLGRAC 157

Query: 128 EHVLRAQTGRELVPVERRAGDER--VEAICTALETEDACRIDPGALASRLGVSREHFHRL 185
              + A   R +  +     + R  +E +   +E   A RI    LA  + +S   FH L
Sbjct: 158 NDTVVALLQRHISALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSESQFHVL 217

Query: 186 FRVAVGMAPAHYARLARIGRAKALLREGRAQ-ADVAAQCGFADQAHFSRWFRRCFGVTPG 244
           F+  +G+ P  Y    R+  AK L+ +GR     VA   GF++Q+ F+  F R  G++P 
Sbjct: 218 FKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLHGISPS 277

Query: 245 NYMAR 249
            Y  R
Sbjct: 278 QYKRR 282