Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 11/240 (4%)

Query: 18  HFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTAGVSAQGFRMVMLY 77
           +F  H H  ++VG I  G   F   G   IA    I+L+    +HT   + +G       
Sbjct: 35  NFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGHSAVEGGWAYKAM 94

Query: 78  VPHAWAEARLGWPVGLRGE---LLNGVWHDAAMADALACAARSGDGVAVGRLLEHVLRAQ 134
            P     A +   +G           V +D  +A  L     + +      L E ++ A 
Sbjct: 95  YPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLEKSTNRLLRETLIYAS 154

Query: 135 TGRELVPVERRA--GDERVEAICTALETEDACRIDPGA------LASRLGVSREHFHRLF 186
             + +    R A   D+ + A+   L  ++     P A      LA   G+S  H  R F
Sbjct: 155 LVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVRTF 214

Query: 187 RVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWFRRCFGVTPGNY 246
           +   G+ P  Y   AR+  AK LL++G + ++ A +CGF DQ+H  R F++  G+TP  Y
Sbjct: 215 QKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRHFKKALGITPKQY 274



 Score = 27.3 bits (59), Expect = 3e-04
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 179 REHFHRLFRVAVGMAPAHYAR 199
           + H HR F+ A+G+ P  YAR
Sbjct: 256 QSHLHRHFKKALGITPKQYAR 276