Pairwise Alignments

Query, 127 a.a., Chromosome partition protein smc from Variovorax sp. SCN45

Subject, 801 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 15/136 (11%)

Query: 3   TEPPLTTQ------------QQKLRVLLVEDDADTLATTLKLLEALGHWATGVKSAEAAI 50
           TEPP  T+              + R+LLV+DD      T ++L+ LG       S E A+
Sbjct: 658 TEPPAATEPTAALSAGSQEDNSQHRILLVDDDHAVREVTAQMLQNLGFAVIEADSGEHAL 717

Query: 51  ARFFDGA-FDVVMVDIGLPALSGRDLAERL-LNDHRVPVVFVTGQAEPA-TAMKGTVWLR 107
               +G   D+++ D  +P ++G +LA  + +    +PV+FVTG AE     + G   ++
Sbjct: 718 QLLGEGIEVDLLLADFAMPGMNGGELARAVRVGQPELPVIFVTGYAELCELGLVGYSIIQ 777

Query: 108 KPYTIEQLTQTLERSL 123
           KP+  +QL   +  +L
Sbjct: 778 KPFREDQLANKIHLAL 793



 Score = 26.6 bits (57), Expect = 8e-04
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 12  QKLRVLLVEDDADTLATTLKLLEALGHWATG--VKSAEAAIARFFDGAFDVVMVDIGLPA 69
           + + VL +ED           LE  G+      V S    +      +FD+++ D  LP 
Sbjct: 5   KNISVLFIEDSPHDAELAQLALERSGYTLHTELVYSHAGVVEALQRRSFDLILADFILPG 64

Query: 70  LSG-RDLAERLLNDHRVPVVFVTGQAEPATAMKGTVWLRKPYTIEQ----LTQTLERSLA 124
            SG + L E      + P +F++G      A+         Y ++Q    L + +ER+LA
Sbjct: 65  FSGSQALQEAQRLAPQTPFIFLSGVFGEEHAVNMMRSGAVDYVLKQKLGFLPKAVERALA 124

Query: 125 AV 126
            V
Sbjct: 125 EV 126