Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  208 bits (530), Expect = 1e-58
 Identities = 117/312 (37%), Positives = 174/312 (55%), Gaps = 4/312 (1%)

Query: 1   MFAYLLRRIAMTIPTLLLVSIAVFTLMRLIPGDPVLLMLGEGA-DPAQLALMRHQMGLDQ 59
           +  ++ RR A+TIP LL++S  VF L+ + PGDPV  +LG  A DPA LA +R +  LD 
Sbjct: 23  LVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDD 82

Query: 60  PLPVQYLVWLRHALTGDLGVSTTNGLAVLPLIWERFQVSAVIVLVAVALASLIAVPAGLV 119
            L VQY  WL   + GDLGVS     +V   I +R  V+  + L++  L   + +  G +
Sbjct: 83  SLLVQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGAL 142

Query: 120 AAWRKDKPTDLAIIGAATLMLSVPSFWLGLLLLMFFGQYLGWLPVVGYVPMSENFSQGVL 179
           AA+R+    D  ++  +   +S P+F  G+  L  FG  L W P  G       F     
Sbjct: 143 AAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFG---AGTGFLDRAW 199

Query: 180 YVILPIATLLLVETGVLTRMSRASTIEILRLEYVTHARAKGVPESQVLRRHVLPNAFNPT 239
           ++ LP   L      ++ +++RA+ IE L  +YVT ARA+GV   ++L  +VL N+  P 
Sbjct: 200 HLALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPV 259

Query: 240 LTMIGLILGHLLSGIAVLETVFTLPGLGRLMIDSIFARDYPVLQGCLLFTACIYVVINLV 299
           +T  GLI+  +L+G   +E  F+LPGLG LMID++  RD P +QG  L  +   V++NL 
Sbjct: 260 ITAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLA 319

Query: 300 VDLCYPLFDPRV 311
           VD+ Y L DPR+
Sbjct: 320 VDVIYTLIDPRI 331