Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  198 bits (503), Expect = 2e-55
 Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 9/314 (2%)

Query: 1   MFAYLLRRIAMTIPTLLLVSIAVFTLMRLIPGDPVLLMLGEG---ADPAQLALMRHQMGL 57
           M  + LRR+   IPT+++V++ +F +  ++PG     +  +G   ADP  +A +  + GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 58  DQPLPVQYLVWLRHALTGDLGVSTTNGLAVLPLIWERFQVSAVIVLVAVALASLIAVPAG 117
           ++PL  +++ ++      DLG S      V+ LI +R   S  + + A+  A +I+VP G
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 118 LVAAWRKDKPTDLAIIGAATLMLSVPSFWLGLLLLMFFGQYLGWLPVVGYVPMSENFSQG 177
            VAA R     D   +  A   LS+P FWLGLL++  F   L WLP  GY   S      
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGSFR---- 176

Query: 178 VLYVILPIATLLLVETGVLTRMSRASTIEILRLEYVTHARAKGVPESQVLRRHVLPNAFN 237
              +ILP  TL +    +L R +RA  +++L  +++  A +KG+ E++V+R HV  NA  
Sbjct: 177 --NLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALV 234

Query: 238 PTLTMIGLILGHLLSGIAVLETVFTLPGLGRLMIDSIFARDYPVLQGCLLFTACIYVVIN 297
             +T +GL  G L+    V+E +F  PG+G L++DS+ +RD PV+QG +L     ++VIN
Sbjct: 235 LIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVIN 294

Query: 298 LVVDLCYPLFDPRV 311
             VDL Y   DPR+
Sbjct: 295 TAVDLIYAAIDPRI 308