Pairwise Alignments

Query, 338 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 485 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  135 bits (341), Expect = 2e-36
 Identities = 95/312 (30%), Positives = 150/312 (48%), Gaps = 35/312 (11%)

Query: 29  AEPAKDHPLVGRYEGAVLDGYKAAAYDEVGLIKEPFQNWAGGKPDLLPVEGKVTLYLYRL 88
           A+ A DHPL+GR  G+ +  YK   + +V ++       +G      P++ K+T   Y++
Sbjct: 199 AQGATDHPLLGRIPGSYITSYKQTNFTQVPVLV----GISGADYQTKPLDAKLTQITYQM 254

Query: 89  PRERSLLEVQRNYESSLKAKGFEVLFSC-GTANASCYKPRPGSVDTTTPYDFALAFDNPE 147
           P   SL E+  NY ++ +    E +F C GTA            D +      L  D+ E
Sbjct: 255 PESYSLFEINSNYAAAAQKLQAERVFHCKGTACGD---------DDSLINAIKLIKDDKE 305

Query: 148 --WPRLGSRGDYARNYFAVSGRYLLAKKTGPSGTVYASIALAEHNADVGNHAFVRVVETK 205
             W                   Y L K +   G VY  I    +         +RV+E  
Sbjct: 306 DEWQE-----------------YQLFKLSHAKGDVYFDIYSQGYFDGTPADTTLRVMELS 348

Query: 206 AMEDNKIVFVDATAMQKSLAETGRINLYGILFDLDKDIIRPESQPTLDEMTKLMRGNPPL 265
            ++D+++  ++  A+  ++++TG+  L G+LFD D + + PES+P L+ +   ++ NP L
Sbjct: 349 TLKDDRVA-INLDALTDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLASYLKQNPKL 407

Query: 266 KLSVVGHTDAQGDAKHNDDLSKRRALAVIAVLVKA-GVDPRRFTTRGAGSAEPVAPNDSE 324
              VVGHTD +G+  +N  LS+RRA AVI  L     +   + T  G G   PVA N ++
Sbjct: 408 SFYVVGHTDDKGERSYNQSLSERRAAAVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTND 467

Query: 325 AGRAKNRRVELV 336
           AG+  NRRVELV
Sbjct: 468 AGQKLNRRVELV 479



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 24/51 (47%), Positives = 26/51 (50%)

Query: 69  GGKPDLLPVEGKVTLYLYRLPRERSLLEVQRNYESSLKAKGFEVLFSCGTA 119
           G K  LLPV GK+T     LP   S   V  NY + LK    EVLFSC  A
Sbjct: 56  GDKFTLLPVSGKLTRQSVELPEGYSPEHVINNYLAQLKKLNAEVLFSCKAA 106