Pairwise Alignments

Query, 1031 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1045 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score =  491 bits (1263), Expect = e-142
 Identities = 322/1041 (30%), Positives = 542/1041 (52%), Gaps = 32/1041 (3%)

Query: 1    MINLIITQFFRRRHLVWAMSIALVLFGAWSWTQMTVEAYPDLGDVTVQVTTQVNGLASEE 60
            M+  II    R+R +V  +++ + ++G     +  ++A PDL DV V + T   G A + 
Sbjct: 1    MLKYIIESSIRQRLMVLIIAMMITVWGIQELRKTPLDALPDLSDVQVIIKTPYPGQAPKL 60

Query: 61   IEQQITTPLERALSNTPGLASIRSSSTFGLSLITLTFKDGTDDYFARQRVTERIGQVS-- 118
            +E+Q+T PL  A+   PG  ++R  S FG S + + F+DGTD Y+AR RV E + Q+S  
Sbjct: 61   VEEQVTYPLSTAMLAVPGAKTVRGYSMFGDSYVYVIFEDGTDIYWARSRVLEYLSQISSR 120

Query: 119  LPSGAQPGLDPVAGPAGEIYRYTL--ESDTKNLMELSEIQRWIVIPGLRQVAGVVNITNF 176
            LP G QP L P A   G ++ Y L   S   +L +L  +Q W +   L+ VAGV  +   
Sbjct: 121  LPQGVQPSLGPDASGVGWVFEYALVDRSGNLDLSQLKSLQDWYLKLELQSVAGVSEVATV 180

Query: 177  GGFTKEFQLELDPAALQKYGLALSDVVTAINNNSANAGGGRIARGEQSYVVRGIGLITSL 236
            GG  + +Q+ L+P  +  Y L ++ V  AI+  ++ AGG  +   E  Y+VR  G   +L
Sbjct: 181  GGMEQTYQIVLEPDKMAIYKLDIAAVKQAIDKANSEAGGSVVEMAEAEYMVRAKGYRQTL 240

Query: 237  DDLGAVV--VSQSGGSPVLVRDLGRLQFGHQERGGILGKDRNPDTIEGIVLMLKYENPSR 294
            +D   +   ++   G+ +L++D+  ++ G   R GI   D   + + GIV+M   EN   
Sbjct: 241  EDFREIPLGITSPSGTGLLLKDVATVRKGPASRRGIAELDGEGEVVGGIVVMRYGENALA 300

Query: 295  VLEGVHKKIDELQAQLAPMGVKIVPYIDRDDLVKLTVDKVTHTVLEGMALVCFVLILFLG 354
             ++ V  K++EL+  L P GV+I+P  DR  L++ +VD +   V+E M +V  V +LFL 
Sbjct: 301  TIDAVKAKLEELKTGL-PDGVEIIPTYDRSQLIQKSVDNLFSKVVEEMLVVGLVCLLFLL 359

Query: 355  SPRSAVVAAVAIPMSLVTVFIVMHFTRMPANLFSLG--AIDFGIIVDGAIVVMEAILRRR 412
              RS +VA + +P+S++  FIVM+   + AN+ SLG  AI  G +VDGAIV++E + +  
Sbjct: 360  HARSTLVAVITLPLSILIAFIVMNKMGVNANIMSLGGIAIAIGAVVDGAIVMIENLHKHL 419

Query: 413  E-------EEPHATLTEGNILETVSHVSGPIFFATLIIITAYFPLFAFERAEGKLFKPMA 465
            E        EP        + E    V   +FF+ +II  ++ P+FA E  EG+LF P+A
Sbjct: 420  EHFKAEHDREPSVKEHWRIVTEASIEVGPALFFSLIIITLSFVPVFALEAQEGRLFAPLA 479

Query: 466  FTVGYALVGALLCAITLIPSLAYVALRKPMKPFVNKPLV-WLTGAYRRVLGHLLRVPAIA 524
            +T  +A+  A   +ITL+P L    +R  +    + P+   L   Y+  L  +L+ P I 
Sbjct: 480  YTKTFAMAAAAFLSITLVPILMGYFIRGKIPSERSNPISRVLIALYQPALKLVLKFPKIT 539

Query: 525  YALSIAALAAVAILGATAGREFLPDIDEG-ALWLQVQLPSGLSLDKASEMTAELRHVLLE 583
              L++ ALA+        G EF+P ++EG  L++   LP G+S  KA+E+  +   ++  
Sbjct: 540  ILLALVALASAWYPMTRMGSEFMPALEEGDLLYMPTALP-GISASKAAEVLQQTDRLIKT 598

Query: 584  YPEVSYVVTQLGRNDDGTDPWTPSHVEVPVGLKPYSEWPAGVNKAAFVRTLNERFSKMPG 643
             PEV+ V  ++GR +  TDP   + +E  + LKP+ EW  G+     +  L +   K+PG
Sbjct: 599  VPEVARVFGKVGRAETATDPAPLTMLETTIMLKPHEEWREGMTLDGIINQLQQTV-KVPG 657

Query: 644  FDVGISQPIIDGVNDAVGGAHSPLVLRIYGDDLKESRRIGNEIVDLLHTVRGTASASLFQ 703
                  QPI   ++    G  +P+ ++I G D+ E + +G +I  +L  V  T SA   +
Sbjct: 658  LTNAWVQPIKTRIDMLSTGIKTPVGIKITGADVNELQTLGAKIEAILSKVPHTKSAYAER 717

Query: 704  EPPIPQVVIKLDREAAARLGVNANDVASLVQTGMGGAPVITVYSGDRTYNVTVKLPKSAK 763
                  + I    + AAR G+   D+  +V+  +GG  +     G   Y + ++ P+  +
Sbjct: 718  SGGGRYIDISPKLDVAARYGMTLQDIQDVVRYAIGGMDIGESVQGAERYPINLRYPRELR 777

Query: 764  SGTEAIGSLLLNGAGGAKIPLSQVASVKLQTGESTISHELNSRQIT-VRIDNRGRDLASY 822
               E +  L +    G  +PL  +A +++  G   +  E N R I+ V ID  G  +  Y
Sbjct: 778  DNIEKLRELPVITKSGHYLPLRNLADIEINDGAPMLKSE-NGRLISWVFIDIEGTSIGEY 836

Query: 823  LVEAQDRIAKDVKFDHAKFRLQWAGQFENQQRAQARLAVSLLIVVSIMAVLLFFQFGKIR 882
            +  A+  + +++     ++   +AGQ+E  QR  A+L   + + + ++ +LL   FG   
Sbjct: 837  IAAAKTALDEELVVP-PRYSYSFAGQYEYMQRVDAKLKQVIPMALGVIFILLMMTFGSTM 895

Query: 883  HVALILGVVPMATLGGLIAVHVAGETLNVATAVGFIALFGVSIQNGIIMVA---NFRRVR 939
              ++I+  +P A +G    +++    ++VA AVG IAL GV+ + G++M+    N  + R
Sbjct: 896  QASIIMLSLPFALVGSTWLLYLLDYNISVAVAVGMIALAGVAAEFGVVMLVYLNNAIKHR 955

Query: 940  GEGLA------LEASVLEGATERLRPVLMTATVASIGMLPAALATGVGTDVQRGLATVVV 993
             E         L+ +++EGA  R+RP  MT      G+LP     G G DV + +A  +V
Sbjct: 956  QEKNTYHTVEDLKEALIEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNDVMQKIAAPMV 1015

Query: 994  GGLVVSTLLTLFILPTLFFAL 1014
            GG+V + +L+LF+LP L+  +
Sbjct: 1016 GGMVTAPILSLFVLPALYLLI 1036